RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 IGFBPL1Q8WX77 278 aa18.2■□□□□ 0.5
TARDBP-228ENST00000629725 RBBP8Q99708 897 aa18.2■□□□□ 0.5
TARDBP-228ENST00000629725 BRINP2Q9C0B6 783 aa18.2■□□□□ 0.5
TARDBP-228ENST00000629725 BCAP29Q9UHQ4 241 aa18.2■□□□□ 0.5
TARDBP-228ENST00000629725 FBXL2Q9UKC9 423 aa18.2■□□□□ 0.5
TARDBP-228ENST00000629725 CXorf49A8MYA2 514 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-228ENST00000629725 GMPRP36959 345 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 KIR2DL2P43627 348 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-228ENST00000629725 HMGCS1Q01581 520 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 TNK1Q13470 666 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 CPSF6Q16630 551 aaKnown RBP eCLIP18.19■□□□□ 0.5
TARDBP-228ENST00000629725 HEPHL1Q6MZM0 1159 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 PODNL1Q6PEZ8 512 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 ZBED8Q8IZ13 594 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 CDKL2Q92772 493 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 TMCO6Q96DC7 493 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 ZNF845Q96IR2 970 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-228ENST00000629725 ATOH8Q96SQ7 321 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 ZNF701Q9NV72 531 aaPredicted RBP18.19■□□□□ 0.5
TARDBP-228ENST00000629725 PSD3Q9NYI0 1048 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 HEY2Q9UBP5 337 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 DKKL1Q9UK85 242 aa18.19■□□□□ 0.5
TARDBP-228ENST00000629725 MRPS18CQ9Y3D5 142 aaKnown RBP18.19■□□□□ 0.5
TARDBP-228ENST00000629725 LRRC14BA6NHZ5 514 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 E7ESA3 106 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 KERAO60938 352 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 SEC31AO94979 1220 aaKnown RBP18.18■□□□□ 0.5
TARDBP-228ENST00000629725 ATP5J2P56134 94 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 SIRPAP78324 504 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 CAPRIN1Q14444 709 aaKnown RBP18.18■□□□□ 0.5
TARDBP-228ENST00000629725 EXOSC7Q15024 291 aaKnown RBP18.18■□□□□ 0.5
TARDBP-228ENST00000629725 BCL2A1Q16548 175 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 PRICKLE4Q2TBC4 344 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 C22orf34Q6ZV56 151 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 CAVIN3Q969G5 261 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 CPNE1Q99829 537 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 NMRAL1Q9HBL8 299 aa18.18■□□□□ 0.5
TARDBP-228ENST00000629725 FOXE1O00358 373 aaPredicted RBP18.17■□□□□ 0.5
TARDBP-228ENST00000629725 UGDHO60701 494 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 TMCC2O75069 709 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 CGAP01215 116 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 IFNA2P01563 188 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 TCEA1P23193 301 aaKnown RBP18.17■□□□□ 0.5
TARDBP-228ENST00000629725 NEK2P51955 445 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 NR1H2P55055 460 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 MAP4K2Q12851 820 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 DLG1Q12959 904 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 ANKRD34AQ69YU3 496 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 FAM111BQ6SJ93 734 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 RAPH1Q70E73 1250 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 UBQLNLQ8IYU4 475 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 ADCY4Q8NFM4 1077 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 WDR20Q8TBZ3 569 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 COL21A1Q96P44 957 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 PLLPQ9Y342 182 aa18.17■□□□□ 0.5
TARDBP-228ENST00000629725 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.16■□□□□ 0.5
TARDBP-228ENST00000629725 OR6C70A6NIJ9 312 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 TP73O15350 636 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 EMC8O43402 210 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 ZIC3O60481 467 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 SOX30O94993 753 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 SEMA3DO95025 777 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 CD8BP10966 210 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 PEPDP12955 493 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 DRD5P21918 477 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 GP5P40197 560 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 DR1Q01658 176 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 MGAT2Q10469 447 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 BEX5Q5H9J7 111 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 OR5M10Q6IEU7 315 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 TBC1D1Q86TI0 1168 aaPredicted RBP18.16■□□□□ 0.5
TARDBP-228ENST00000629725 ZNF610Q8N9Z0 462 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 MAPK1IP1LQ8NDC0 245 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 KLHL4Q9C0H6 718 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 MAT2BQ9NZL9 334 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 ZNF639Q9UID6 485 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 SNX12Q9UMY4 172 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 ABCA1O95477 2261 aa18.16■□□□□ 0.5
TARDBP-228ENST00000629725 GOLGA6L10A6NI86 522 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 SYCE1LA8MT33 242 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 EFCAB8A8MWE9 144 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 RNF223E7ERA6 249 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 TP53P04637 393 aaPredicted RBP18.15■□□□□ 0.5
TARDBP-228ENST00000629725 ATP1B1P05026 303 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 KLK1P06870 262 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 MTHFD2P13995 350 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 TBXA2RP21731 343 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 DPP4P27487 766 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 SSTR1P30872 391 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 PPICP45877 212 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 FGFBP1Q14512 234 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 ZNF704Q6ZNC4 412 aaPredicted RBP18.15■□□□□ 0.5
TARDBP-228ENST00000629725 SH2D5Q6ZV89 423 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 KLHL7Q8IXQ5 586 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 OR52R1Q8NGF1 315 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 PYROXD1Q8WU10 500 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 TMEM158Q8WZ71 300 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 FIG4Q92562 907 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 TMBIM1Q969X1 311 aa18.15■□□□□ 0.5
TARDBP-228ENST00000629725 SERPINI1Q99574 410 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms