RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 TIMM10P62072 90 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 CDKL1Q00532 357 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 BCL2L1Q07817 233 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 HSPA14Q0VDF9 509 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 PDE7AQ13946 482 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 NFE2L1Q14494 772 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 KRT31Q15323 416 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 TOR1AIP1Q5JTV8 583 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 CCDC158Q5M9N0 1113 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 ASPHD2Q6ICH7 369 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 RHBDD2Q6NTF9 364 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 DCLRE1AQ6PJP8 1040 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 ZFP2Q6ZN57 461 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 TRPM8Q7Z2W7 1104 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 GLRX5Q86SX6 157 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 ASPGQ86U10 573 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 LUZP1Q86V48 1076 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 HOOK3Q86VS8 718 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 VSIG1Q86XK7 387 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 MR1Q95460 341 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 AP2M1Q96CW1 435 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 SPATA17Q96L03 361 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 NRTNQ99748 197 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 CNPY3Q9BT09 278 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 HCAR1Q9BXC0 346 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 NAPBQ9H115 298 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 OPN3Q9H1Y3 402 aaPredicted RBP1.45□□□□□ -2.18
SCN1A-208ENST00000625916 OR51J1Q9H342 316 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 GLIPR2Q9H4G4 154 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 ZDHHC6Q9H6R6 413 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 TECRQ9NZ01 308 aaKnown RBP1.45□□□□□ -2.18
SCN1A-208ENST00000625916 MRTO4Q9UKD2 239 aaKnown RBP1.45□□□□□ -2.18
SCN1A-208ENST00000625916 EXOC7Q9UPT5 735 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 KCNK6Q9Y257 313 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 ATG4BQ9Y4P1 393 aa1.45□□□□□ -2.18
SCN1A-208ENST00000625916 AFF2P51816 1311 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 DLGAP1O14490 977 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 NOL4O94818 638 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 SLC16A8O95907 504 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 HSP90AA1P07900 732 aaKnown RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 H2AFZP0C0S5 128 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CT45A8P0DMV1 189 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CT45A9P0DMV2 189 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 IGFBP5P24593 272 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 STIP1P31948 543 aaKnown RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 HERVK_113P61574 105 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 ST8SIA6P61647 398 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 RBP5P82980 135 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 DAZ2Q13117 558 aaKnown RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 ZNF630Q2M218 657 aaPredicted RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 MPPE1Q53F39 396 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CT45A2Q5DJT8 189 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 SULT1C3Q6IMI6 304 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 STEAP1BQ6NZ63 245 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 HSD17B13Q7Z5P4 300 aaPredicted RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 ADAMTSL2Q86TH1 951 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 TMEM126BQ8IUX1 230 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 SIAH3Q8IW03 269 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CCDC83Q8IWF9 413 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 LINC00518Q8N0U6 118 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CLYBLQ8N0X4 340 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CCDC71LQ8N9Z2 235 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 RELL2Q8NC24 303 aaPredicted RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 OR6M1Q8NGM8 313 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 ANKRD49Q8WVL7 239 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 CXorf58Q96LI9 332 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 PANX3Q96QZ0 392 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 MLPHQ9BV36 600 aaPredicted RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 UTP14AQ9BVJ6 771 aaKnown RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 SLC17A9Q9BYT1 436 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 SLC26A1Q9H2B4 701 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 DCTPP1Q9H773 170 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 ESM1Q9NQ30 184 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 DAZ3Q9NR90 486 aaKnown RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 DNAJC17Q9NVM6 304 aaKnown RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 PHF11Q9UIL8 331 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 EMCNQ9ULC0 261 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 SLC9A8Q9Y2E8 581 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 PRG3Q9Y2Y8 225 aaPredicted RBP1.44□□□□□ -2.18
SCN1A-208ENST00000625916 PPIAL4AQ9Y536 164 aa1.44□□□□□ -2.18
SCN1A-208ENST00000625916 KIR2DS1A0A191URI9 304 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 C13orf42A0A1B0GVH6 325 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 USP27XA6NNY8 438 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 YJEFN3A6XGL0 299 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 PSMA7O14818 248 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 TTI1O43156 1089 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 TYROBPO43914 113 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 NME6O75414 186 aaPredicted RBP1.43□□□□□ -2.18
SCN1A-208ENST00000625916 GMNNO75496 209 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 UFL1O94874 794 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 FCER2P06734 321 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 CHRNGP07510 517 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 NUDT17P0C025 328 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 B4GALT1P15291 398 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 SERPINB6P35237 376 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 TNFSF10P50591 281 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 EGFEM1PQ0D2K5 195 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 BFSP1Q12934 665 aa1.43□□□□□ -2.18
SCN1A-208ENST00000625916 KIR2DS1Q14954 304 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms