RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SIGIRRQ6IA17 410 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 TAS1R3Q7RTX0 852 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 TMEM174Q8WUU8 243 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 MALSU1Q96EH3 234 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 URM1Q9BTM9 101 aaKnown RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 ALG8Q9BVK2 526 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 POT1Q9NUX5 634 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 GPRC5BQ9NZH0 403 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 VAPAQ9P0L0 249 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 CYP8B1Q9UNU6 501 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SDC3O75056 442 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 PCCBP05166 539 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 HCKP08631 526 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 C1GALT1C1LP0DN25 315 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 C21orf33P30042 268 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 ASAH1Q13510 395 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 KIAA1211LQ6NV74 962 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 RGMBQ6NW40 437 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SSX9Q7RTT3 188 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 HIST1H2AAQ96QV6 131 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 INPP5KQ9BT40 448 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 C11orf54Q9H0W9 315 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 METTL17Q9H7H0 456 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 ATP13A2Q9NQ11 1180 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 MARCH4Q9P2E8 410 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SLC33A1O00400 549 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ITGA5P08648 1049 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 KCNC1P48547 511 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ZNF791Q3KP31 576 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 ENPP7Q6UWV6 458 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ZNF546Q86UE3 836 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 C12orf40Q86WS4 652 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 OR4K5Q8NGD3 323 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ZCCHC10Q8TBK6 192 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 GIMAP5Q96F15 307 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 RXFP3Q9NSD7 469 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SLX4Q8IY92 1834 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 OR2A25A4D2G3 310 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 CLDN7O95471 211 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ETFAP13804 333 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ACRV1P26436 265 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 IDUAP35475 653 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 AQP2P41181 271 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 CREB5Q02930 508 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 PLK5Q496M5 336 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 TIGD5Q53EQ6 642 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SPIN3Q5JUX0 258 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 GAREM2Q75VX8 874 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 OR5D16Q8NGK9 328 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 LMLNQ96KR4 655 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 WRAP53Q9BUR4 548 aaKnown RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 SLC5A7Q9GZV3 580 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 IFT22Q9H7X7 185 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 CARS2Q9HA77 564 aaKnown RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 UFSP2Q9NUQ7 469 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SLC6A5Q9Y345 797 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 FCER2P06734 321 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 VSX2P58304 361 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 NFATC2Q13469 925 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 MEF2DQ14814 521 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 C6orf120Q7Z4R8 191 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 TMEM150AQ86TG1 271 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 LAX1Q8IWV1 398 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 PAQR8Q8TEZ7 354 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 BOLA1Q9Y3E2 137 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 RAB40ALP0C0E4 278 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 OR8U9P0C7N5 309 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 AKR1C4P17516 323 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 LRIT3Q3SXY7 679 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 GRAMD2AQ8IUY3 354 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 STK35Q8TDR2 534 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 SPRYD4Q8WW59 207 aaPredicted RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 RAB40AQ8WXH6 277 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 METTL2AQ96IZ6 378 aaKnown RBP8.48□□□□□ -1.05
VCL-206ENST00000623461 SMOQ99835 787 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 OR2AG1Q9H205 316 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 ATG4BQ9Y4P1 393 aa8.48□□□□□ -1.05
VCL-206ENST00000623461 EMC8O43402 210 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 UGDHO60701 494 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 UBE2NLQ5JXB2 153 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SLC24A5Q71RS6 500 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 FAM122BQ7Z309 247 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SLC51BQ86UW2 128 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 OR6N2Q8NGY6 317 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SLC35B4Q969S0 331 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ERVMER34-1Q9H9K5 563 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 FAM72CH0Y354 149 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 RNASET2O00584 256 aaKnown RBP8.47□□□□□ -1.05
VCL-206ENST00000623461 SOCS5O75159 536 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 SLC34A2O95436 690 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 RAB3DO95716 219 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ADH1AP07327 375 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 ACP2P11117 423 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 DDCP20711 480 aa8.47□□□□□ -1.05
VCL-206ENST00000623461 GPR143P51810 404 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms