RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 KIAA1614Q5VZ46 1190 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 LRFN4Q6PJG9 635 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 C19orf47Q8N9M1 422 aaKnown RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 OR2L3Q8NG85 312 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 OR2L8Q8NGY9 312 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PMM1Q92871 262 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 TCTN2Q96GX1 697 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 FBXL20Q96IG2 436 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 SLC45A3Q96JT2 553 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PIP5K1AQ99755 562 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 ORAI3Q9BRQ5 295 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 SMIM30A4D0T7 59 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 GABRR3A8MPY1 467 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 FMO6PO60774 539 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 NOS1APO75052 506 aaPredicted RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 F10P00742 488 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 CELP19835 753 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 TCN2P20062 427 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 TACR1P25103 407 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 SDC2P34741 201 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 RAB25P57735 213 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 HSD11B2P80365 405 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 HOXC5Q00444 222 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 GAS6Q14393 721 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 TMEM52BQ4KMG9 183 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 EEF1A1P5Q5VTE0 462 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 GALNT15Q8N3T1 639 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 MFSD2AQ8NA29 543 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 RCBTB1Q8NDN9 531 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 OR2T33Q8NG76 320 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 PDLIM5Q96HC4 596 aaKnown RBP8.74□□□□□ -1.01
GGA3-223ENST00000621870 DHRS1Q96LJ7 313 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 LTB4R2Q9NPC1 389 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 MUTYHQ9UIF7 546 aa8.74□□□□□ -1.01
GGA3-223ENST00000621870 BRWD3Q6RI45 1802 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 B3GALT4O96024 378 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 IGLV3-25P01717 112 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 ZNF84P51523 738 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 DCDC1P59894 354 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 ADAM8P78325 824 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 HTRA4P83105 476 aaPredicted RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 SMAD2Q15796 467 aaKnown RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 ERI1Q8IV48 349 aaKnown RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 OR51L1Q8NGJ5 315 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 CCL4L1Q8NHW4 92 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 CEP76Q8TAP6 659 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 RSC1A1Q92681 617 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 UBXN10Q96LJ8 280 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 FEVQ99581 238 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 TMED9Q9BVK6 235 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 TRPV5Q9NQA5 729 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 EMCNQ9ULC0 261 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 TSC22D4Q9Y3Q8 395 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 PCDHGB1Q9Y5G3 927 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 RNF215Q9Y6U7 377 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 A0A1B0GVI7 797 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 H7C0S8 307 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 NME4O00746 187 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 NARSO43776 548 aaKnown RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 ITGA10O75578 1167 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 ZFAND5O76080 213 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 HCKP08631 526 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 CLUP10909 449 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 OR3A3P47888 321 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 OR3A2P47893 321 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 IL18R1Q13478 541 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 METTL2BQ6P1Q9 378 aaKnown RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 MEIOBQ8N635 442 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 OR52R1Q8NGF1 315 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 OR51Q1Q8NH59 317 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 C1GALT1Q9NS00 363 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 HS3ST3A1Q9Y663 406 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 THSD7AQ9UPZ6 1657 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 H3BNX3 289 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 SNAP29O95721 258 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 IGLV3-27P01718 113 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 ZNF43P17038 809 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 PRKCAP17252 672 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 PRKXP51817 358 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 RGNQ15493 299 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 RBM48Q5RL73 367 aaKnown RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 PRAMEF8Q5VWM4 474 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 PRAMEF7Q5VXH5 474 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 KIAA1211LQ6NV74 962 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 SPRED2Q7Z698 418 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 ZSWIM9Q86XI8 627 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 GPR137CQ8N3F9 429 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 PACRGLQ8N7B6 248 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 C9orf43Q8TAL5 461 aaPredicted RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 GNPDA2Q8TDQ7 276 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 NR4A3Q92570 626 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 KCNN1Q92952 543 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 LRRC46Q96FV0 321 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 DSN1Q9H410 356 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 TRIM36Q9NQ86 728 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 BTNL2Q9UIR0 455 aa8.73□□□□□ -1.01
GGA3-223ENST00000621870 TRIP12Q14669 1992 aaPredicted RBP8.73□□□□□ -1.01
GGA3-223ENST00000621870 TRBV11-1A0A0K0K1C0 115 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms