RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR10G2Q8NGC3 310 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 OR51A7Q8NH64 312 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ZFPM2Q8WW38 1151 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ADOQ96SZ5 270 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 NMNAT1Q9HAN9 279 aaPredicted RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 IL1RAPQ9NPH3 570 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 NECTIN3Q9NQS3 549 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ARMC1Q9NVT9 282 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 RPS6KA6Q9UK32 745 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ZNF292O60281 2723 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 GALR3O60755 368 aaPredicted RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 HPGDP15428 266 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 AHRP35869 848 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 RPS18P62269 152 aaKnown RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 SEC23BQ15437 767 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 SLC36A3Q495N2 470 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 COQ5Q5HYK3 327 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FOXB2Q5VYV0 432 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 PPP4R4Q6NUP7 873 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 SERPINA11Q86U17 422 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 PSD4Q8NDX1 1056 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 TNIP2Q8NFZ5 429 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 TTLQ8NG68 377 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 GATA6Q92908 595 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 WDR34Q96EX3 536 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ALPK1Q96QP1 1244 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 NDC1Q9BTX1 674 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FNDC11Q9BVV2 318 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FLRT3Q9NZU0 649 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 PILRAQ9UKJ1 303 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FAM183AA6NL82 134 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 REM1O75628 298 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 FADS2O95864 444 aaKnown RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 BMP2P12643 396 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 PCBP4P57723 403 aaKnown RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 SPEM2Q0P670 501 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 UGT2A3Q6UWM9 527 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ZNF574Q6ZN55 896 aaPredicted RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 TSEN54Q7Z6J9 526 aaKnown RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 CALHM3Q86XJ0 350 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 DCP2Q8IU60 420 aaKnown RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
VPS11-208ENST00000621676 FOXN4Q96NZ1 517 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 CUTCQ9NTM9 273 aa9.84□□□□□ -0.83
VPS11-208ENST00000621676 ANKRD11Q6UB99 2663 aaPredicted RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 SLC35F4A4IF30 521 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 C17orf105B2RV13 164 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 WWP2O00308 870 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 FFAR1O14842 300 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 CDC40O60508 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS11-208ENST00000621676 C21orf33P30042 268 aaPredicted RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 TGFBR1P36897 503 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 CTSKP43235 329 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 SLC9A3P48764 834 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 TNFRSF17Q02223 184 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 KCNC4Q03721 635 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 CD47Q08722 323 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 BLMHQ13867 455 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 PDZK1Q5T2W1 519 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 EIF3MQ7L2H7 374 aaKnown RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 NKAIN4Q8IVV8 208 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 CA13Q8N1Q1 262 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 OR4C3Q8NH37 302 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 C10orf90Q96M02 699 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 TBX5Q99593 518 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 DSN1Q9H410 356 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 GORASP2Q9H8Y8 452 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 ATP13A2Q9NQ11 1180 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 OLAHQ9NV23 265 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 TVP23BQ9NYZ1 205 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 DNAJC27Q9NZQ0 273 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 PIEZO1Q92508 2521 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 LOC100130705A0A1B0GUX0 176 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 OR5K4A6NMS3 321 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 BCKDKO14874 412 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 LRRTM2O43300 516 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 DUX1O43812 170 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 PIP5K1CO60331 668 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 ZIC2O95409 532 aaPredicted RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 ALPLP05186 524 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 LINGO3P0C6S8 592 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 TRHRP34981 398 aaPredicted RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 CLCN2P51788 898 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 RPP38P78345 283 aaKnown RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 CBLL1Q75N03 491 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 CLVS1Q8IUQ0 354 aaPredicted RBP9.83□□□□□ -0.84
VPS11-208ENST00000621676 VWA5B2Q8N398 1253 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 METTL25Q8N6Q8 603 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 C1orf216Q8TAB5 229 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 ADAMTS16Q8TE57 1224 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 ZDHHC12Q96GR4 267 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 EPS8L2Q9H6S3 715 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 FAM118AQ9NWS6 357 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 IMPAD1Q9NX62 359 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 P2RX2Q9UBL9 471 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 CDC14AQ9UNH5 594 aa9.83□□□□□ -0.84
VPS11-208ENST00000621676 FAM171A2A8MVW0 826 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 TOR1BO14657 336 aa9.82□□□□□ -0.84
VPS11-208ENST00000621676 SCO2O43819 266 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms