RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZNF227Q86WZ6 799 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 OR5T2Q8NGG2 359 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 NPAS1Q99742 590 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 POLR1EQ9GZS1 481 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CDC42BPBQ9Y5S2 1711 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 GRXCR1A8MXD5 290 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MPIP34949 423 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ETV5P41161 510 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ARSDP51689 593 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MARCH8Q5T0T0 291 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CAPN13Q6MZZ7 669 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 WDR53Q7Z5U6 358 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 LRRTM1Q86UE6 522 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 CPOQ8IVL8 374 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 RASGEF1AQ8N9B8 481 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ZCCHC10Q8TBK6 192 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 LINC01599Q8WXQ3 324 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 MRPL38Q96DV4 380 aaKnown RBP4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ELP4Q96EB1 424 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 PTDSS2Q9BVG9 487 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 RCE1Q9Y256 329 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 ARHGAP23Q9P227 1491 aa4.8□□□□□ -1.64
VPS13D-214ENST00000620676 KLF8O95600 359 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 UBCP0CG48 685 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 GGT2P36268 569 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC19A1P41440 591 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ERVPABLB-1P60509 514 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NKAPLQ5M9Q1 402 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ARFGAP1Q8N6T3 406 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OR4M1Q8NGD0 313 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OSBPL2Q9H1P3 480 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 C14orf166Q9Y224 244 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MEMO1Q9Y316 297 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 UNC119BA6NIH7 251 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SNAPC5O75971 98 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CYP2B6P20813 491 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CDH5P33151 784 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MAPK8P45983 427 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ART1P52961 327 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CARD18P57730 90 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC22A10Q63ZE4 541 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NUSAP1Q9BXS6 441 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 STK25O00506 426 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FZD7O75084 574 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 GASTP01350 101 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SDHAP31040 664 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.79□□□□□ -1.642e-6■■□□□ 11.7
VPS13D-214ENST00000620676 PROX2Q3B8N5 592 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 PRSS42Q7Z5A4 293 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DBF4BQ8NFT6 615 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OR5W2Q8NH69 310 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FBXL18Q96ME1 805 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OR2M2Q96R28 347 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 WRAP53Q9BUR4 548 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 VAPAQ9P0L0 249 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FBXW11Q9UKB1 542 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FBXL21Q9UKT6 434 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ADAM18Q9Y3Q7 739 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RIMS1Q86UR5 1692 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NFASCO94856 1347 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KIAA1210Q9ULL0 1709 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 A0A1W2PPH5 198 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 NPIPA2E9PIF3 369 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 F12P00748 615 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 EDN3P14138 238 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ELK1P19419 428 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 HTR3AP46098 478 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CAPSQ13938 189 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ADGRG2Q8IZP9 1017 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FBXL6Q8N531 539 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FAM26EQ8N5C1 309 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 BBS1Q8NFJ9 593 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 OR52B4Q8NGK2 314 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CLEC4DQ8WXI8 215 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 PDCD2LQ9BRP1 358 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 EIF2B3Q9NR50 452 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CSNK1G3Q9Y6M4 447 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TRBV4-1A0A0J9YWV2 114 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KHNYNO15037 678 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 MAFKO60675 156 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 CELF2O95319 508 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 APBA3O96018 575 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ADAP00813 363 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TAGLN2P37802 199 aaKnown RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 WNT7BP56706 349 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 TUBB3Q13509 450 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RPE65Q16518 533 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SLC9B2Q86UD5 537 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KIAA1143Q96AT1 154 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-214ENST00000620676 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 FCRL1Q96LA6 429 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 IL21RQ9HBE5 538 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 KLHL21Q9UJP4 597 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 HEXBP07686 556 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF252P-AS1Q0IIN9 211 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 SSX7Q7RTT5 188 aa4.79□□□□□ -1.64
VPS13D-214ENST00000620676 DTD1Q8TEA8 209 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms