RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CA13	Q8N1Q1	262 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	APCDD1L	Q8NCL9	501 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	B3GNT7	Q8NFL0	401 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	VPS39	Q96JC1	886 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	GPATCH1	Q9BRR8	931 aa	Known RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	UNK	Q9C0B0	810 aa	Known RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	NAA50	Q9GZZ1	169 aa	Known RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	POLE3	Q9NRF9	147 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	OLAH	Q9NV23	265 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CLCF1	Q9UBD9	225 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	PHF11	Q9UIL8	331 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CRLS1	Q9UJA2	301 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CARD8	Q9Y2G2	431 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	AP4B1	Q9Y6B7	739 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	F5	P12259	2224 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	ISM1	B1AKI9	464 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	KLRC4-KLRK1	H3BQV0	150 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	AURKA	O14965	403 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	SMAD7	O15105	426 aa	Known RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	NPHS1	O60500	1241 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	GOT2	P00505	430 aa	Known RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	TPTE	P56180	551 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	POU4F1	Q01851	419 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	SLC34A1	Q06495	639 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	TGM3	Q08188	693 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	MAP4K2	Q12851	820 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	GPR19	Q15760	415 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	TRMT5	Q32P41	509 aa	Known RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	DNAL1	Q4LDG9	190 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	SFRP5	Q5T4F7	317 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	IRAK1BP1	Q5VVH5	260 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	NKAIN2	Q5VXU1	208 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZCCHC23	Q6ZST2	131 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CMC1	Q7Z7K0	106 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	ADGRG3	Q86Y34	549 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	MISP	Q8IVT2	679 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CTAGE3P	Q8IX95	158 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	BEST3	Q8N1M1	668 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	OR5L2	Q8NGL0	311 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	FNDC8	Q8TC99	324 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	KLK6	Q92876	244 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	UCN3	Q969E3	161 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	PPP1R36	Q96LQ0	422 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	BTBD9	Q96Q07	612 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	NTMT1	Q9BV86	223 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	FSD1L	Q9BXM9	530 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZFP64	Q9NPA5	681 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	FANCF	Q9NPI8	374 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CRNN	Q9UBG3	495 aa	Predicted RBP	4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	KCNK6	Q9Y257	313 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	CFL2	Q9Y281	166 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	DLGAP4	Q9Y2H0	992 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	SNX8	Q9Y5X2	465 aa		4.99	□□□□□ -1.61
CBWD3-215	ENST00000619322	LOC100653049	A0A140TA62	436 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	ARHGEF33	A8MVX0	844 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	RGS13	O14921	159 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	HDAC3	O15379	428 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	KRT34	O76011	436 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	WDR47	O94967	919 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	RCBTB2	O95199	551 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	AIFM1	O95831	613 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	ATP1B1	P05026	303 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	TFAP2A	P05549	437 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	C2	P06681	752 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	FH	P07954	510 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	CPA3	P15088	417 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	SESN2	P58004	480 aa	Predicted RBP	4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	STXBP1	P61764	594 aa	Known RBP	4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	MADCAM1	Q13477	382 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	CCNI	Q14094	377 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	NRF1	Q16656	503 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	TRIM16L	Q309B1	348 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	C1orf185	Q5T7R7	199 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	C1orf146	Q5VVC0	180 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	LIPM	Q5VYY2	423 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	PID1	Q7Z2X4	250 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZNF781	Q8N8C0	355 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	SH3GL1	Q99961	368 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	ECSIT	Q9BQ95	431 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	LMF2	Q9BU23	707 aa	Known RBP	4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	FAM60A	Q9NP50	221 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	C12orf4	Q9NQ89	552 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	PNPO	Q9NVS9	261 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	STOX2	Q9P2F5	926 aa	Predicted RBP	4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	IFT80	Q9P2H3	777 aa	Predicted RBP	4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	DNAJC16	Q9Y2G8	782 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	COMMD3-BMI1	R4GMX3	469 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	ANKRD12	Q6UB98	2062 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322		A0A096LPK6	155 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322		A0A0A6YYD5	115 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	OVOL3	O00110	214 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	PLOD2	O00469	737 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	KLHL2	O95198	593 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	NTN1	O95631	604 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	CLPTM1	O96005	669 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	PRB1	P04280	392 aa		4.98	□□□□□ -1.61
CBWD3-215	ENST00000619322	TCN1	P20061	433 aa	Predicted RBP	4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms