RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SLC27A4Q6P1M0 643 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 ZNF530Q6P9A1 599 aaPredicted RBP1.91□□□□□ -2.1
TARDBP-220ENST00000618606 CASC1Q6TDU7 716 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 IGFL2Q6UWQ7 119 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 CES3Q6UWW8 571 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 TRMT11Q7Z4G4 463 aaKnown RBP1.91□□□□□ -2.1
TARDBP-220ENST00000618606 SLC43A2Q8N370 569 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 TEX26Q8N6G2 289 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 LRRC17Q8N6Y2 441 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 RNF149Q8NC42 400 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 CCDC197Q8NCU1 140 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 OR2T34Q8NGX1 318 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 FBXO30Q8TB52 745 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 U2AF1L4Q8WU68 220 aaKnown RBP1.91□□□□□ -2.1
TARDBP-220ENST00000618606 SHC3Q92529 594 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 RAB39BQ96DA2 213 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 DEFB118Q96PH6 123 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 ERGIC2Q96RQ1 377 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 TSPAN18Q96SJ8 248 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 SSX3Q99909 188 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 AGPAT1Q99943 283 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 RAB33BQ9H082 229 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 TRPV6Q9H1D0 765 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 WDR41Q9HAD4 459 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 ACOXLQ9NUZ1 547 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 MIS18AQ9NYP9 233 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 PLEK2Q9NYT0 353 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 TECRQ9NZ01 308 aaKnown RBP1.91□□□□□ -2.1
TARDBP-220ENST00000618606 DHRS4-AS1Q9P1J3 65 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 POLKQ9UBT6 870 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 LAMP5Q9UJQ1 280 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 DIMT1Q9UNQ2 313 aaKnown RBP1.91□□□□□ -2.1
TARDBP-220ENST00000618606 SATB2Q9UPW6 733 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 MRPL11Q9Y3B7 192 aaKnown RBP1.91□□□□□ -2.1
TARDBP-220ENST00000618606 MFHAS1Q9Y4C4 1052 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 NCAPD2Q15021 1401 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 ZMYM6O95789 1325 aa1.91□□□□□ -2.1
TARDBP-220ENST00000618606 KDRP35968 1356 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 A0A1B0GWJ7 208 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ZSCAN5CA6NGD5 496 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF253O75346 499 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 VPS26AO75436 327 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 TXNDC12O95881 172 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 MBD3O95983 291 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 IGKV3-11P04433 115 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PCCBP05166 539 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 CA3P07451 260 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 SFTPBP07988 381 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PBLDP30039 288 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PPP2R1AP30153 589 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ADSSP30520 456 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 STIP1P31948 543 aaKnown RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ADRA1AP35348 466 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 SOX6P35712 828 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 DLSTP36957 453 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 SLC1A3P43003 542 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 BACE1P56817 501 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ACTR1AP61163 376 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 MYBPC1Q00872 1141 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 NAAAQ02083 359 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 CNTN1Q12860 1018 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PDZK1IP1Q13113 114 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 SNTB2Q13425 540 aaKnown RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 BTG3Q14201 252 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ADPRMQ3LIE5 342 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 SNRNP48Q6IEG0 339 aaKnown RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 CAPN13Q6MZZ7 669 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 FAM159AQ6UWV7 190 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ARSKQ6UWY0 536 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 C15orf52Q6ZUT6 534 aaKnown RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 YRDCQ86U90 279 aaKnown RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 CERS5Q8N5B7 392 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 TMEM99Q8N816 258 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 BCORP1Q8N888 145 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 FAM71CQ8NEG0 241 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 DENND6BQ8NEG7 585 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 OR6T1Q8NGN1 323 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 OR13C5Q8NGS8 318 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PHYHIPQ92561 330 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 P3H4Q92791 437 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 TMEM45BQ96B21 275 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF274Q96GC6 653 aaPredicted RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PCED1BQ96HM7 432 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 RANBP9Q96S59 729 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 CBWD1Q9BRT8 395 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 EDEM2Q9BV94 578 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 FTHL17Q9BXU8 183 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 TMEM117Q9H0C3 514 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 WWP1Q9H0M0 922 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 ATG10Q9H0Y0 220 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 SLC26A1Q9H2B4 701 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 PNNQ9H307 717 aaKnown RBP1.9□□□□□ -2.11
TARDBP-220ENST00000618606 TSPY26PQ9H489 355 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 CALHM2Q9HA72 323 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 C3orf14Q9HBI5 128 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 VAT1LQ9HCJ6 419 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 MYOZ2Q9NPC6 264 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 EXOC1Q9NV70 894 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 DCAF16Q9NXF7 216 aa1.9□□□□□ -2.11
TARDBP-220ENST00000618606 VNN3Q9NY84 501 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms