RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SLC13A4Q9UKG4 626 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 SLC9A8Q9Y2E8 581 aa11.65□□□□□ -0.54
CIITA-212ENST00000618207 TNRC18O15417 2968 aaPredicted RBP11.65□□□□□ -0.55
CIITA-212ENST00000618207 NPIPA5A0A0B4J1W7 369 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 OR2A25A4D2G3 310 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 HTR3EA5X5Y0 456 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 A6NCN8 305 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 OR2W5A6NFC9 320 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SHISA7A6NL88 538 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 NPIPA7E9PJI5 369 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CDC123O75794 336 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 NADKO95544 446 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
CIITA-212ENST00000618207 NPIPA8P0DM63 369 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CLK1P49759 484 aaKnown RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 UGT2B15P54855 530 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 MED22Q15528 200 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 ZNF770Q6IQ21 691 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 BHLHB9Q6PI77 547 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 BTLAQ7Z6A9 289 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 TDHQ8IZJ6 230 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 DENND6BQ8NEG7 585 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 OR4K5Q8NGD3 323 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 RERGQ96A58 199 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 C8orf33Q9H7E9 229 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 IL21RQ9HBE5 538 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CA14Q9ULX7 337 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CLPXO76031 633 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SHC2P98077 582 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 ALDH6A1Q02252 535 aaKnown RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 MAP4K2Q12851 820 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 KIR2DS3Q14952 304 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SUZ12Q15022 739 aaKnown RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 MLC1Q15049 377 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 GPR68Q15743 365 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 TIGD6Q17RP2 521 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SYT6Q5T7P8 510 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 PGBD2Q6P3X8 592 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 DEPDC4Q8N2C3 294 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 TCEANCQ8N8B7 351 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 TMEM52Q8NDY8 209 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 KLHL6Q8WZ60 621 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 RNF31Q96EP0 1072 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SLC35A4Q96G79 324 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CNDP2Q96KP4 475 aaKnown RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 NECTIN4Q96NY8 510 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 GPA33Q99795 319 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SLC38A1Q9H2H9 487 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 PLGRKTQ9HBL7 147 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 ZBTB20Q9HC78 741 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 TRNAU1APQ9NX07 287 aaKnown RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 IL20RAQ9UHF4 553 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 KCND3Q9UK17 655 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 PCDHGB1Q9Y5G3 927 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 TLR4O00206 839 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 B3GALT2O43825 422 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 ENTPD6O75354 484 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CKMT1AP12532 417 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 MMP11P24347 488 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 OPRL1P41146 370 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 C21orf59P57076 290 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 TAS2R41P59536 307 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 ZC3H14Q6PJT7 736 aaKnown RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 ZNF554Q86TJ5 538 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SLC7A5P1Q8MH63 180 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 LRRC25Q8N386 305 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 OR4K14Q8NGD5 310 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 OR56A1Q8NGH5 318 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 IPCEF1Q8WWN9 437 aaPredicted RBP11.64□□□□□ -0.55
CIITA-212ENST00000618207 MYDGFQ969H8 173 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 SLC6A18Q96N87 628 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 OR5M11Q96RB7 305 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 ZFYVE21Q9BQ24 234 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CCDC3Q9BQI4 270 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 GIN1Q9NXP7 522 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 CNIH4Q9P003 139 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 FTSJ1Q9UET6 329 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 DAPP1Q9UN19 280 aa11.64□□□□□ -0.55
CIITA-212ENST00000618207 PCDH15Q96QU1 1955 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 CENPVL1A0A0U1RR11 272 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 SGK494L7N484 410 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 CDK1P06493 297 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 NT5EP21589 574 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 TNFRSF17Q02223 184 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 HHEXQ03014 270 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 EIF2B5Q13144 721 aaKnown RBP11.63□□□□□ -0.55
CIITA-212ENST00000618207 EXOSC7Q15024 291 aaKnown RBP11.63□□□□□ -0.55
CIITA-212ENST00000618207 CLEC12AQ5QGZ9 265 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ATAD3BQ5T9A4 648 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ZER1Q7Z7L7 766 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ZNF675Q8TD23 568 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 RASSF5Q8WWW0 418 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 C10orf90Q96M02 699 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 FAM60AQ9NP50 221 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 INIPQ9NRY2 104 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 REV1Q9UBZ9 1251 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 SH3PXD2BA1X283 911 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms