RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZNF840PA6NDX5 716 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 ZNF623O75123 536 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 SLC2A10O95528 541 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 MT-ND4P03905 459 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 HNMTP50135 292 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 CTSCP53634 463 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 PTSQ03393 145 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 FAM209BQ5JX69 171 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 SHEQ5VZ18 495 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 TMEM81Q6P7N7 255 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 PRSS45Q7RTY3 260 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 ZER1Q7Z7L7 766 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 GPR135Q8IZ08 494 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 FTMTQ8N4E7 242 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 CLDN22Q8N7P3 220 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 BBS1Q8NFJ9 593 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 GANCQ8TET4 914 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 C16orf78Q8WTQ4 265 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 SPRYD4Q8WW59 207 aaPredicted RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 ATF6BQ99941 703 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 B4GALT6Q9UBX8 382 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 FBXW2Q9UKT8 454 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 ADAP00813 363 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 MRPL3P09001 348 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 ZNF30P17039 623 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 PTX3P26022 381 aaPredicted RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 SHC1P29353 583 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 CDH11P55287 796 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 B2MP61769 119 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 ZNF33BQ06732 778 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 NDUFAF5Q5TEU4 345 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 LYPD4Q6UWN0 246 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 RFT1Q96AA3 541 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 C12orf57Q99622 126 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 IER2Q9BTL4 223 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 PPP1R3EQ9H7J1 279 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 MED20Q9H944 212 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 PLXNA4Q9HCM2 1894 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 CPSF4LA6NMK7 179 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 PRMT3O60678 531 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 HCN1O60741 890 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 NDUFS6O75380 124 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 OC90Q02509 493 aaPredicted RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 SF3A2Q15428 464 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 ZNF630Q2M218 657 aaPredicted RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 GPR33Q49SQ1 333 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 FAM92BQ6ZTR7 304 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 DGLUCYQ7Z3D6 616 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 TRMT11Q7Z4G4 463 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 ADCK2Q7Z695 626 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 BOLLQ8N9W6 283 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 TEX47Q8TBZ9 253 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 DOK4Q8TEW6 326 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 FAM46AQ96IP4 442 aaKnown RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 UROC1Q96N76 676 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 RSPO3Q9BXY4 272 aaPredicted RBP12.43□□□□□ -0.42
MSH6-214ENST00000616033 RNF186Q9NXI6 227 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 CDH10Q9Y6N8 788 aa12.43□□□□□ -0.42
MSH6-214ENST00000616033 ERAL1O75616 437 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 VNN2O95498 520 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 IFNA16P05015 189 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CKMP06732 381 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 ITGB7P26010 798 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CD70P32970 193 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 ACVR1BP36896 505 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 ATP12AP54707 1039 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 STXBP1P61764 594 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 ILKQ13418 452 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 MEDAGQ5VYS4 303 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 LIPJQ5W064 366 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 MZT2AQ6P582 158 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 GPR155Q7Z3F1 870 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 SERINC5Q86VE9 423 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 NLGN3Q9NZ94 848 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 H2AFY2Q9P0M6 372 aaPredicted RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 HCN3Q9P1Z3 774 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 FLVCR2Q9UPI3 526 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 RNASET2O00584 256 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 PRKRAO75569 313 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 IGSF6O95976 241 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 RECKO95980 971 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 ANXA3P12429 323 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CPEP16870 476 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 GPR4P46093 362 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CTAG1AP78358 180 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 AANATQ16613 207 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 MSANTD1Q6ZTZ1 278 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 Q6ZVU0 165 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CFAP206Q8IYR0 622 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 CHST14Q8NCH0 376 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 MARVELD1Q9BSK0 173 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 OR51J1Q9H342 316 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
MSH6-214ENST00000616033 THSD1Q9NS62 852 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 RASD1Q9Y272 281 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 NTNG1Q9Y2I2 539 aa12.42□□□□□ -0.42
MSH6-214ENST00000616033 SCN2AQ99250 2005 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms