RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 NCOA6Q14686 2063 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SERPINB1P30740 379 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ALDH6A1Q02252 535 aaKnown RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 STX5Q13190 355 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 GAB1Q13480 694 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 TERF2Q15554 542 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SPRED3Q2MJR0 410 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 NDUFAF6Q330K2 333 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 EIPR1Q53HC9 387 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SPIN4Q56A73 249 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 PAGE2Q7Z2X7 111 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 LCA5Q86VQ0 697 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 GBP7Q8N8V2 638 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SLC16A11Q8NCK7 471 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 OR5D16Q8NGK9 328 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 DIO2Q92813 273 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SPACA9Q96E40 222 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC126Q96EE4 140 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC120Q96HB5 630 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 VSTM2LQ96N03 204 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 RILPQ96NA2 401 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 RNF32Q9H0A6 362 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SERHL2Q9H4I8 314 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 SIRT3Q9NTG7 399 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-208ENST00000614678 ALKBH4Q9NXW9 302 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 TMCO1Q9UM00 188 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 NPFFR2Q9Y5X5 522 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 CREBBPQ92793 2442 aa5.23□□□□□ -1.57
CPNE3-208ENST00000614678 NPHS1O60500 1241 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 BCAS1O75363 584 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FGF4P08620 206 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MYZAPP0CAP1 466 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 COX7A2P14406 83 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CD46P15529 392 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 STARP49675 285 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FIGNL1Q6PIW4 674 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 DOLPP1Q86YN1 238 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FAM26EQ8N5C1 309 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 PPP1R14CQ8TAE6 165 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 OMA1Q96E52 524 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 C5orf34Q96MH7 638 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 UCK2Q9BZX2 261 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CXorf36Q9H7Y0 433 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 TRIM45Q9H8W5 580 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 WDR41Q9HAD4 459 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CLK4Q9HAZ1 481 aaKnown RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MIEF1Q9NQG6 463 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CNOT11Q9UKZ1 510 aaKnown RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MED12LQ86YW9 2145 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MYO1GB0I1T2 1018 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF195O14628 629 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 PCDH17O14917 1159 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 C6orf47O95873 294 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 SERPINE1P05121 402 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CASP3P42574 277 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CDKN2CP42773 168 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 UFM1P61960 85 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 PPIAP62937 165 aaKnown RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MAP4K2Q12851 820 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 OR4F3Q6IEY1 312 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 NIPAL1Q6NVV3 410 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 YRDCQ86U90 279 aaKnown RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 WDR75Q8IWA0 830 aaKnown RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 WDSUB1Q8N9V3 476 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 ZFP62Q8NB50 900 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 ST6GALNAC3Q8NDV1 305 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MYRIPQ8NFW9 859 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 ELP4Q96EB1 424 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 GIMAP5Q96F15 307 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FOLH1BQ9HBA9 442 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 AHSPQ9NZD4 102 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF780BQ9Y6R6 833 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MYO9AB2RTY4 2548 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 SDHDO14521 159 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FCHO1O14526 889 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 TFECO14948 347 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 ICOSLGO75144 302 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CSNK2A2P19784 350 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 KCNJ2P63252 427 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CEBPEQ15744 281 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CCDC71Q8IV32 467 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 SLC44A2Q8IWA5 706 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FCRL1Q96LA6 429 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 GPR137Q96N19 417 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 BBS4Q96RK4 519 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 MYNNQ9NPC7 610 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 RPH3AQ9Y2J0 694 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-208ENST00000614678 SNX8Q9Y5X2 465 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 FREM1Q5H8C1 2179 aa5.22□□□□□ -1.57
CPNE3-208ENST00000614678 CCL21O00585 134 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 ANKRD28O15084 1053 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 SCO2O43819 266 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 GSNP06396 782 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 FBXO45P0C2W1 286 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 NEFHP12036 1026 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 HBA1P69905 142 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 STX3Q13277 289 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 PGS1Q32NB8 556 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 GTDC1Q4AE62 458 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms