RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 GCNT6Q5T4J0 391 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 MFSD4BQ5TF39 518 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 LCN10Q6JVE6 187 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 LCN8Q6JVE9 175 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 FAM111BQ6SJ93 734 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ANGPTL8Q6UXH0 198 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 PTOV1Q86YD1 416 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ZZZ3Q8IYH5 903 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 MICU2Q8IYU8 434 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 LGI4Q8N135 537 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 GALNT6Q8NCL4 622 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 FAM156AQ8NDB6 213 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 NUP43Q8NFH3 380 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ADCY4Q8NFM4 1077 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 PNPT1Q8TCS8 783 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 JADE3Q92613 823 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 KAT2AQ92830 837 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 RIT1Q92963 219 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 MR1Q95460 341 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 TSLPQ969D9 159 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 GIMAP5Q96F15 307 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 RBM18Q96H35 190 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 SERHL2Q9H4I8 314 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 DENND2DQ9H6A0 471 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 TMEM38AQ9H6F2 299 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 ACTR3BQ9P1U1 418 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 GMPR2Q9P2T1 348 aaKnown RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 BCAP29Q9UHQ4 241 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 GPN3Q9UHW5 284 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-212ENST00000613856 MAGEL2Q9UJ55 1249 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 MKL2Q9ULH7 1088 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 SNX13Q9Y5W8 968 aa10.65□□□□□ -0.7
SLIRP-212ENST00000613856 IDSB3KWA1 339 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 H0YHG0 523 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 K7EM74 188 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 PCDH17O14917 1159 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 ARPC2O15144 300 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 STAMBPO95630 424 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 CBX7O95931 251 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 HMGN2P05204 90 aaKnown RBP10.64□□□□□ -0.71
SLIRP-212ENST00000613856 HEXBP07686 556 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 RAB40ALP0C0E4 278 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 CT62P0C5K7 136 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 ARAFP10398 606 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 SFTPCP11686 197 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 ETFAP13804 333 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 LIFP15018 202 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 GGT1P19440 569 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 TCN1P20061 433 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-212ENST00000613856 S1PR1P21453 382 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 CD82P27701 267 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 PCGF2P35227 344 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 CRATP43155 626 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 UQCRFS1P47985 274 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 PRIM2P49643 509 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 DSTNP60981 165 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 MS4A2Q01362 244 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 FUT7Q11130 342 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 VEZF1Q14119 521 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 FLOT2Q14254 428 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 KPNB1Q14974 876 aaKnown RBP10.64□□□□□ -0.71
SLIRP-212ENST00000613856 ADRM1Q16186 407 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 ZNF630Q2M218 657 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-212ENST00000613856 VMACQ2NL98 169 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 MTX3Q5HYI7 312 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 MFSD12Q6NUT3 480 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 CDC73Q6P1J9 531 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 ZCCHC12Q6PEW1 402 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 C6orf15Q6UXA7 325 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-212ENST00000613856 DGAT2L6Q6ZPD8 337 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 IFNEQ86WN2 208 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 SLC30A8Q8IWU4 369 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 FAM26EQ8N5C1 309 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 OR52E4Q8NGH9 312 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 OR14A16Q8NHC5 309 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 WDR60Q8WVS4 1066 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 HOXB13Q92826 284 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-212ENST00000613856 RNF31Q96EP0 1072 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 TRIM15Q9C019 465 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 A4GALTQ9NPC4 353 aa10.64□□□□□ -0.71
SLIRP-212ENST00000613856 TNRC6AQ8NDV7 1962 aaKnown RBP10.63□□□□□ -0.71
SLIRP-212ENST00000613856 MYOCOSA0A1B0GUC4 107 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 OR2W5A6NFC9 320 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 A8MUI8 341 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-212ENST00000613856 DYRK3O43781 588 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 PRAMEF2O60811 474 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 ALOX12BO75342 701 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 SOX30O94993 753 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 AGR2O95994 175 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 IFNA16P05015 189 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 ATP6V1B2P21281 511 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 MATN1P21941 496 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 MAN2A2P49641 1150 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 EEF1A2Q05639 463 aaKnown RBP10.63□□□□□ -0.71
SLIRP-212ENST00000613856 DUSP8Q13202 625 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 LASP1Q14847 261 aaKnown RBP10.63□□□□□ -0.71
SLIRP-212ENST00000613856 NSDHLQ15738 373 aa10.63□□□□□ -0.71
SLIRP-212ENST00000613856 TRMT12Q53H54 448 aaKnown RBP10.63□□□□□ -0.71
SLIRP-212ENST00000613856 MLIPQ5VWP3 458 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms