RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ITGAMP11215 1152 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 GPX2P18283 190 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 SLC6A2P23975 617 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 ITGA3P26006 1051 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 ITPKBP27987 946 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 CRATP43155 626 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 KHKP50053 298 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 PSME3P61289 254 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 PSPHP78330 225 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 SLC25A3Q00325 362 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 CHAF1BQ13112 559 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 FADDQ13158 208 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 RGNQ15493 299 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 C8orf82Q6P1X6 216 aaPredicted RBP13.63□□□□□ -0.23
CD48-203ENST00000613788 PGAM4Q8N0Y7 254 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 SLC5A8Q8N695 610 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 SLC16A11Q8NCK7 471 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 HOXB13Q92826 284 aaPredicted RBP13.63□□□□□ -0.23
CD48-203ENST00000613788 ADIPOR1Q96A54 375 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 LCORQ96JN0 433 aaPredicted RBP13.63□□□□□ -0.23
CD48-203ENST00000613788 BTBD9Q96Q07 612 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 STACQ99469 402 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 ECSITQ9BQ95 431 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 YIPF4Q9BSR8 244 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 ITPAQ9BY32 194 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 PIGUQ9H490 435 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
CD48-203ENST00000613788 THUMPD1Q9NXG2 353 aaKnown RBP13.63□□□□□ -0.23
CD48-203ENST00000613788 TEKT2Q9UIF3 430 aa13.63□□□□□ -0.23
CD48-203ENST00000613788 ASNA1O43681 348 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 PRKNO60260 465 aaPredicted RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 NME6O75414 186 aaPredicted RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 NKX2-2O95096 273 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 MAP3K8P41279 467 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 MTPNP58546 118 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 PSG6Q00889 435 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.62□□□□□ -0.23
CD48-203ENST00000613788 H3F3CQ6NXT2 135 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 TNFAIP8L2Q6P589 184 aaPredicted RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 RPS19BP1Q86WX3 136 aaKnown RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 APLFQ8IW19 511 aaPredicted RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 SLC44A2Q8IWA5 706 aaPredicted RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 TAGAPQ8N103 731 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 LGI4Q8N135 537 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 GALNT16Q8N428 558 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 AMER2Q8N7J2 671 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 RBM15BQ8NDT2 890 aaKnown RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 GPR151Q8TDV0 419 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 THAP3Q8WTV1 239 aaPredicted RBP13.62□□□□□ -0.23
CD48-203ENST00000613788 HSPBAP1Q96EW2 488 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 CPNE5Q9HCH3 593 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 Q9N2J8 555 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 SPAG4Q9NPE6 437 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 DUSP22Q9NRW4 184 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 EXD2Q9NVH0 621 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 TAS2R1Q9NYW7 299 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 MYOTQ9UBF9 498 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 DTX4Q9Y2E6 619 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 KCNMB2Q9Y691 235 aa13.62□□□□□ -0.23
CD48-203ENST00000613788 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 FRG2CA6NGY1 282 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 ACOX3O15254 700 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 C1QCP02747 245 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 CT45A8P0DMV1 189 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 CT45A9P0DMV2 189 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 ACP2P11117 423 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 GABRA3P34903 492 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 CPOXP36551 454 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 MVDP53602 400 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 CASP9P55211 416 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 NRG3P56975 720 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 RPS26P62854 115 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 CT45A2Q5DJT8 189 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 RABL3Q5HYI8 236 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 COX20Q5RI15 118 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 EXOSC6Q5RKV6 272 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 ATAD3BQ5T9A4 648 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 TCTN3Q6NUS6 607 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 WDR53Q7Z5U6 358 aaPredicted RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 SLC15A3Q8IY34 581 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 ARMC10Q8N2F6 343 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 SLC15A4Q8N697 577 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 HORMAD2Q8N7B1 307 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 ZNF441Q8N8Z8 693 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 FBXO27Q8NI29 283 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 FBXO30Q8TB52 745 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 BRIX1Q8TDN6 353 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 APOBEC4Q8WW27 367 aaKnown RBP13.61□□□□□ -0.23
CD48-203ENST00000613788 XAGE5Q8WWM1 108 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 TMEM125Q96AQ2 219 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 SLC35A4Q96G79 324 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 ZNF354BQ96LW1 612 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 OR7D2Q96RA2 312 aa13.61□□□□□ -0.23
CD48-203ENST00000613788 IKZF5Q9H5V7 419 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms