RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 S1PR1P21453 382 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MTNR1AP48039 350 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 GPR143P51810 404 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 BMXP51813 675 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CDK3Q00526 305 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZNF45Q02386 682 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 METTL2BQ6P1Q9 378 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CREB3L4Q8TEY5 395 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 C15orf40Q8WUR7 153 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 FAM3CQ92520 227 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 C8orf33Q9H7E9 229 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 DCAF13Q9NV06 445 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MROH6A6NGR9 719 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 HHLA1C9JL84 531 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 KCNJ13O60928 360 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 HMGN2P05204 90 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 SOX9P48436 509 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 SGSHP51688 502 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CEBPGP53567 150 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CDKL1Q00532 357 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 KCTD18Q6PI47 426 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 P4HA3Q7Z4N8 544 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ANKRD13BQ86YJ7 626 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZNF615Q8N8J6 731 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 OR51L1Q8NGJ5 315 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 OR5D16Q8NGK9 328 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MTHFD2LQ9H903 347 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 NMNAT1Q9HAN9 279 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 PELI2Q9HAT8 420 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 TRPV4Q9HBA0 871 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MARCH5Q9NX47 278 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CD8B2A6NJW9 211 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ARNTLO00327 626 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 AK1P00568 194 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 LCKP06239 509 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CD8BP10966 210 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 P2RY2P41231 377 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MAGEA3P43357 314 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 VEZF1Q14119 521 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 GRM7Q14831 915 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ABCA11PQ4W5N1 156 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 LSM14AQ8ND56 463 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 OR4K13Q8NH42 304 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 THAP4Q8WY91 577 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZNF486Q96H40 463 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 HS6ST2Q96MM7 605 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZNF300Q96RE9 604 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 RTP3Q9BQQ7 232 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ACTRT3Q9BYD9 372 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MROQ9BYG7 248 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 HEBP1Q9NRV9 189 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MED11Q9P086 117 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CACNA1CQ13936 2221 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 A0A1W2PPL8 197 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 SLC22A31A6NKX4 558 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 A8MV72 311 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 B4GAT1O43505 415 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CLUP10909 449 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 CDK4P11802 303 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 GSTM2P28161 218 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 RPL13AP3Q6NVV1 102 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 LRFN4Q6PJG9 635 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 GRAMD2AQ8IUY3 354 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 FAM217AQ8IXS0 508 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ACOT4Q8N9L9 421 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 OR9A2Q8NGT5 310 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZDHHC1Q8WTX9 485 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 MKRN2Q9H000 416 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 DNMT3BQ9UBC3 853 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 DKKL1Q9UK85 242 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 FARSAQ9Y285 508 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 PCDHGB6Q9Y5F9 930 aa11.86□□□□□ -0.51
TNFAIP3-206ENST00000612899 TEX51A0A1B0GUA7 166 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 HYKKA2RU49 373 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 RLN2P04090 185 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 PROS1P07225 676 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 PRKCAP17252 672 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 DDCP20711 480 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 ADH7P40394 386 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 TAGLNQ01995 201 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 NFATC3Q12968 1075 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 ZNF791Q3KP31 576 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 LSMEM2Q8N112 164 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 OR52E2Q8NGJ4 325 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 OR2A12Q8NGT7 310 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 GTF2H4Q92759 462 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 CENPOQ9BU64 300 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 CNIH4Q9P003 139 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 RIMS3Q9UJD0 308 aa11.85□□□□□ -0.51
TNFAIP3-206ENST00000612899 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms