RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 IQCHQ86VS3 1027 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 B4GALNT2Q8NHY0 566 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 RPL3LQ92901 407 aaKnown RBP12.77□□□□□ -0.36
NEK3-205ENST00000610828 SLC35A4Q96G79 324 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 MS4A4EQ96PG1 132 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 PRR14Q9BWN1 585 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 MAN2C1Q9NTJ4 1040 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 C2orf42Q9NWW7 574 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 GIN1Q9NXP7 522 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 CALML5Q9NZT1 146 aa12.77□□□□□ -0.36
NEK3-205ENST00000610828 A0A0J9YY10 115 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 DUXAA6NLW8 204 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 OR5K4A6NMS3 321 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 C10orf142B7Z368 130 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 ZSCAN9O15535 394 aaPredicted RBP12.77□□□□□ -0.37
NEK3-205ENST00000610828 FCMRO60667 390 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 LDB3O75112 727 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 LIPAP38571 399 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 PDX1P52945 283 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 HHEXQ03014 270 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 FAM214AQ32MH5 1076 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 MFSD12Q6NUT3 480 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 CASP12Q6UXS9 341 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 SLCO6A1Q86UG4 719 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 SHISA5Q8N114 240 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 FAM160A2Q8N612 972 aaPredicted RBP12.77□□□□□ -0.37
NEK3-205ENST00000610828 ZNF655Q8N720 491 aaPredicted RBP12.77□□□□□ -0.37
NEK3-205ENST00000610828 ZNF675Q8TD23 568 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 CDS1Q92903 461 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 BORCS5Q969J3 196 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 HSPBAP1Q96EW2 488 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 MKLN1Q9UL63 735 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 SLCO1B1Q9Y6L6 691 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 MYO15AQ9UKN7 3530 aa12.77□□□□□ -0.37
NEK3-205ENST00000610828 SH3D21A4FU49 640 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 FAM221BA6H8Z2 402 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 CPMP14384 443 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 TYRP1P17643 537 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 MMP11P24347 488 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 TAS2R41P59536 307 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 ZER1Q7Z7L7 766 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 OR5T3Q8NGG3 340 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 DOK4Q8TEW6 326 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 STARD5Q9NSY2 213 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 WSB2Q9NYS7 404 aaPredicted RBP12.76□□□□□ -0.37
NEK3-205ENST00000610828 TAS2R16Q9NYV7 291 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 GPR55Q9Y2T6 319 aaPredicted RBP12.76□□□□□ -0.37
NEK3-205ENST00000610828 CLDN24A6NM45 220 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 M0R082 166 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 ZIC2O95409 532 aaPredicted RBP12.76□□□□□ -0.37
NEK3-205ENST00000610828 PTHP01270 115 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 PORP16435 677 aaPredicted RBP12.76□□□□□ -0.37
NEK3-205ENST00000610828 AVPR1BP47901 424 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 C21orf59P57076 290 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 TRMT12Q53H54 448 aaKnown RBP12.76□□□□□ -0.37
NEK3-205ENST00000610828 SLX4IPQ5VYV7 408 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 USP53Q70EK8 1073 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 RNF44Q7L0R7 432 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 OR2L13Q8N349 312 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 SLC15A4Q8N697 577 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 RSC1A1Q92681 617 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 SLC38A4Q969I6 547 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 TPSD1Q9BZJ3 242 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 KLK4Q9Y5K2 254 aa12.76□□□□□ -0.37
NEK3-205ENST00000610828 EFCAB10A6NFE3 127 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
NEK3-205ENST00000610828 B4DGG1 531 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 SYT5O00445 386 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 ENTPD6O75354 484 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 SLITRK5O94991 958 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 TGFBR1P36897 503 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 VSX2P58304 361 aaPredicted RBP12.75□□□□□ -0.37
NEK3-205ENST00000610828 SHC2P98077 582 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 INAVAQ3KP66 663 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 OOSP2Q86WS3 158 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 IQCF1Q8N6M8 205 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 CSNK1A1LQ8N752 337 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 MORN4Q8NDC4 146 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 OR52P1PQ8NH57 321 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 MSANTD3Q96H12 275 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 ARMC7Q9H6L4 198 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 LYRM4Q9HD34 91 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 TBC1D23Q9NUY8 699 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 DNAJC27Q9NZQ0 273 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 NTMQ9P121 344 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 CLCA2Q9UQC9 943 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 SPACA6W5XKT8 324 aa12.75□□□□□ -0.37
NEK3-205ENST00000610828 A0A1W2PPC4 97 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 OR5K3A6NET4 321 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 EFCAB9A8MZ26 197 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms