RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SUN3Q8TAQ9 357 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 ARSGQ96EG1 525 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 ALG14Q96F25 216 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 MRPL48Q96GC5 212 aaKnown RBP6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 FYTTD1Q96QD9 318 aaKnown RBP6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC7A5P2Q9GIP4 190 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 IL21Q9HBE4 155 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 FBXL12Q9NXK8 326 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF224Q9NZL3 707 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 SH2B3Q9UQQ2 575 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 NCKAP1Q9Y2A7 1128 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 PCDHGA4Q9Y5G9 962 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 COLEC10Q9Y6Z7 277 aa6.49□□□□□ -1.37
SYNPO2-206ENST00000610556 TRBV5-3A0A0A0MS03 114 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NPIPA5A0A0B4J1W7 369 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM221A6NGB7 291 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 C12orf71A8MTZ7 269 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 FAM47E-STBD1D6RA91 191 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NPIPA7E9PJI5 369 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PPM1DO15297 605 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 INHBBP09529 407 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NPIPA8P0DM63 369 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 CTSEP14091 401 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ALAS2P22557 587 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 CBLP22681 906 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ELAVL4P26378 380 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NAA10P41227 235 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC6A11P48066 632 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PGDP52209 483 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 METAP1P53582 386 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PPP3R1P63098 170 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 HYAL2Q12891 473 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 GPR19Q15760 415 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ODF4Q2M2E3 257 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LRIT3Q3SXY7 679 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 C6orf132Q5T0Z8 1188 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 CCNJQ5T5M9 372 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LAIR1Q6GTX8 287 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 FAM71E1Q6IPT2 247 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 IKBIPQ70UQ0 350 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 AMIGO1Q86WK6 493 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LINC00471Q8N535 108 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ACBD7Q8N6N7 88 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TTLQ8NG68 377 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 METTL2AQ96IZ6 378 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LRIG1Q96JA1 1093 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 MCCC1Q96RQ3 725 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NDC1Q9BTX1 674 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TRIM36Q9NQ86 728 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TXNL4BQ9NX01 149 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TAAR2Q9P1P5 351 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PCDHGA3Q9Y5H0 932 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PLPP1O14494 284 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 MID1O15344 667 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 B3GALT2O43825 422 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 VEGFDO43915 354 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 APODP05090 189 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 SCG5P05408 212 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 DDX6P26196 483 aaKnown RBP eCLIP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ACADLP28330 430 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 GRK5P34947 590 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TM4SF4P48230 202 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 CHRNEQ04844 493 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 BIKQ13323 160 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TATDN3Q17R31 274 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 HENMT1Q5T8I9 393 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF438Q7Z4V0 828 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 CCDC71Q8IV32 467 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PIAS4Q8N2W9 510 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF431Q8TF32 576 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 TXNDC15Q96J42 360 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LYSMD1Q96S90 227 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 NRTNQ99748 197 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 GABARAPL3Q9BY60 117 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 DPH1Q9BZG8 443 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 DDX31Q9H8H2 851 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 DKK3Q9UBP4 350 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 MUTYHQ9UIF7 546 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 INSL6Q9Y581 213 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 KCNE1BA0A087WTH5 132 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 A0A1B0GVT2 93 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC5A10A0PJK1 596 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 CARNS1A5YM72 827 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ANTXRLA6NF34 631 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 FOXE1O00358 373 aaPredicted RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 STK25O00506 426 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 PRODHO43272 600 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LYRM1O43325 122 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 KCNK2O95069 426 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 OR6A2O95222 327 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 GKN3PP0CG01 181 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ARPC4P59998 168 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 HTRA3P83110 453 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 RPL6Q02878 288 aaKnown RBP6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 ILKQ13418 452 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 C1QTNF12Q5T7M4 302 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 BCL2L15Q5TBC7 163 aa6.48□□□□□ -1.37
SYNPO2-206ENST00000610556 LAIR2Q6ISS4 152 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms