RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 C11orf49Q9H6J7 331 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 A0A1W2PP55 124 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 SCAMP2O15127 329 aaKnown RBP12.46□□□□□ -0.42
USP6NL-205ENST00000609104 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 OR4N5Q8IXE1 308 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 ZNF100Q8IYN0 542 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 MMP28Q9H239 520 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 INSL5Q9Y5Q6 135 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 MTMR11A4FU01 709 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 CNR2P34972 360 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 SLC11A1P49279 550 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 MAP4K2Q12851 820 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 LSAMPQ13449 338 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 FAM214AQ32MH5 1076 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 UGT3A2Q3SY77 523 aa12.46□□□□□ -0.42
USP6NL-205ENST00000609104 VSTM2BA6NLU5 285 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 FAM171A2A8MVW0 826 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 HSBP1L1C9JCN9 74 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 ARPC5O15511 151 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 MYF6P23409 242 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 FGFBP1Q14512 234 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SLC7A5P1Q8MH63 180 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 NCDNQ9UBB6 729 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 LRRTM2O43300 516 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 BBS1Q8NFJ9 593 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 DDX1Q92499 740 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SEZ6LQ9BYH1 1024 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 ARPC4-TTLL3A0A0A6YYG9 625 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 PPP1R3DO95685 299 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 EPOP01588 193 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 RPS26P11Q5JNZ5 115 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 BLOC1S3Q6QNY0 202 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SLA2Q9H6Q3 261 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 ANKRD33BA6NCL7 494 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 CTXN1P60606 82 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 RNASE10Q5GAN6 216 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 OR8J1Q8NGP2 316 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TSACCQ96A04 125 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 PRDM9Q9NQV7 894 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 FAM72CH0Y354 149 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 HAPLN1P10915 354 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 KCNE1P15382 129 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 GMPRP36959 345 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 FAM72AQ5TYM5 149 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 FAM72DQ6L9T8 149 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 FAM72BQ86X60 149 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 CLECL1Q8IZS7 167 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 ZNF619Q8N2I2 560 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SYT14Q8NB59 555 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 GPN2Q9H9Y4 310 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TPPPO94811 219 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 PABPC4LP0CB38 370 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 ERVK-25P63136 954 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TLE3Q04726 772 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 OR13J1Q8NGT2 312 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TCTEX1D2Q8WW35 142 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 METTL2AQ96IZ6 378 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 IL17FQ96PD4 163 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 RBPJLQ9UBG7 517 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SSX2Q16385 188 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 NKPD1Q17RQ9 610 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 METTL2BQ6P1Q9 378 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 IGFN1Q86VF2 1251 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 COQ10AQ96MF6 247 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TRIB3Q96RU7 358 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 MEIS3P1A6NDR6 274 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 DENRO43583 198 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 C7P10643 843 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 PNMTP11086 282 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 RAB6AP20340 208 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 OR4D2P58180 307 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SYT3Q9BQG1 590 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TP53I11O14683 189 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SORBS2O94875 1100 aaKnown RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 LMAN2Q12907 356 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 TMEM150AQ86TG1 271 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 NLGN4YQ8NFZ3 816 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-205ENST00000609104 CREB3L4Q8TEY5 395 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 IRF7Q92985 503 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 PTERQ96BW5 349 aa12.45□□□□□ -0.42
USP6NL-205ENST00000609104 SLC16A5O15375 505 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 PITPNBP48739 271 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 IDH3GP51553 393 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-205ENST00000609104 NFATC4Q14934 902 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 IER5LQ5T953 404 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 OR52B6Q8NGF0 335 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 IMP4Q96G21 291 aaKnown RBP12.44□□□□□ -0.42
USP6NL-205ENST00000609104 C1orf226A1L170 272 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 ACTL6BO94805 426 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 GJB5O95377 273 aa12.44□□□□□ -0.42
USP6NL-205ENST00000609104 PORP16435 677 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-205ENST00000609104 RORAP35398 523 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms