RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HOXD10P28358 340 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 PBLDP30039 288 aaPredicted RBP21.07■□□□□ 0.96
SHANK2-220ENST00000608988 SLC6A11P48066 632 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 CDH11P55287 796 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 SNRPD2P62316 118 aaKnown RBP21.07■□□□□ 0.96
SHANK2-220ENST00000608988 TRA2BP62995 288 aaKnown RBP21.07■□□□□ 0.96
SHANK2-220ENST00000608988 ANKRD54Q6NXT1 300 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 PINK1Q9BXM7 581 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.07■□□□□ 0.968e-7■■■□□ 15.6
SHANK2-220ENST00000608988 KCNN2Q9H2S1 579 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 CYSLTR2Q9NS75 346 aa21.07■□□□□ 0.96
SHANK2-220ENST00000608988 XPAP23025 273 aaPredicted RBP21.06■□□□□ 0.96
SHANK2-220ENST00000608988 EVI2BP34910 448 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 BSGP35613 385 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 RFX3P48380 749 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 PER3P56645 1201 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 SHC2P98077 582 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 MEF2AQ02078 507 aaPredicted RBP21.06■□□□□ 0.96
SHANK2-220ENST00000608988 PRKCZQ05513 592 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 HSPB3Q12988 150 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 GPR176Q14439 515 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 OR5M3Q8NGP4 307 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 SUN3Q8TAQ9 357 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 GPA33Q99795 319 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 PITHD1Q9GZP4 211 aaPredicted RBP21.06■□□□□ 0.96
SHANK2-220ENST00000608988 HDHD2Q9H0R4 259 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 TMEM39AQ9NV64 488 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 PRKAG2Q9UGJ0 569 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 SLC23A1Q9UHI7 598 aa21.06■□□□□ 0.96
SHANK2-220ENST00000608988 NUP210Q8TEM1 1887 aaPredicted RBP21.06■□□□□ 0.96
SHANK2-220ENST00000608988 SMIM30A4D0T7 59 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 CARNS1A5YM72 827 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 SYT5O00445 386 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 CHP2O43745 196 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 PLOD3O60568 738 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 SLC22A5O76082 557 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 RBMS1P29558 406 aaKnown RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 UQCRC1P31930 480 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 TALDO1P37837 337 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 RNF144AP50876 292 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 ZNF155Q12901 538 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 AADACL4Q5VUY2 407 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 GET4Q7L5D6 327 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 TP53I13Q8NBR0 393 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 OSTF1Q92882 214 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 RFT1Q96AA3 541 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 WFDC6Q9BQY6 131 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 SORBS1Q9BX66 1292 aaKnown RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 MS4A8Q9BY19 250 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 PLA2G12AQ9BZM1 189 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 OR51I1Q9H343 314 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 DPEP2Q9H4A9 486 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 SERHL2Q9H4I8 314 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 STARD7Q9NQZ5 370 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 ITM2BQ9Y287 266 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 CCDC88CQ9P219 2028 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 C17orf113A0A1B0GUU1 675 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 LEFTY2O00292 366 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 RGS9O75916 674 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 NFATC1O95644 943 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 OR12D1P0DN82 309 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 GABRR2P28476 465 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 STAT5AP42229 794 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 NFE2L1Q14494 772 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 TRAM2Q15035 370 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 SYPL1Q16563 259 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 COL28A1Q2UY09 1125 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 CST9Q5W186 159 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 HBMQ6B0K9 141 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 CFAP206Q8IYR0 622 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 OR8H1Q8NGG4 311 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 LRIG1Q96JA1 1093 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 ZNF514Q96K75 400 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 LINC00615Q96LM1 132 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 GFM1Q96RP9 751 aaKnown RBP21.05■□□□□ 0.96
SHANK2-220ENST00000608988 WACQ9BTA9 647 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 TMED9Q9BVK6 235 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 EXTL2Q9UBQ6 330 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 SRRDQ9UH36 339 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 STON1Q9Y6Q2 735 aa21.05■□□□□ 0.96
SHANK2-220ENST00000608988 A0A0G2JPF8 293 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 HNRNPCL2B2RXH8 293 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 HNRNPCL3B7ZW38 293 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 LILRB5O75023 590 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 TPOP07202 933 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 HNRNPCL4P0DMR1 293 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 CD53P19397 219 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 STOMP27105 288 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 CD276Q5ZPR3 534 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 ZNF740Q8NDX6 193 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 SCMH1Q96GD3 660 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 OR2M2Q96R28 347 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 EGLN3Q9H6Z9 239 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 TBC1D17Q9HA65 648 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 MARK1Q9P0L2 795 aa21.04■□□□□ 0.96
SHANK2-220ENST00000608988 PRAMEF27A3QJZ7 478 aa21.03■□□□□ 0.96
SHANK2-220ENST00000608988 OR5K3A6NET4 321 aa21.03■□□□□ 0.96
SHANK2-220ENST00000608988 LEFTY1O75610 366 aa21.03■□□□□ 0.96
SHANK2-220ENST00000608988 FGBP02675 491 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms