RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 GJB1P08034 283 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PRG2P13727 222 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 AKAP5P24588 427 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 NFYBP25208 207 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ADRA1AP35348 466 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PPT1P50897 306 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 MVDP53602 400 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 GEMP55040 296 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 WNT3AP56704 352 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 UBE2IP63279 158 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZXDBP98169 803 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 FOXK2Q01167 660 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 RNF212Q495C1 297 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SYTL3Q4VX76 610 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 B3GNTL1Q67FW5 361 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 OR7E24Q6IFN5 339 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF621Q6ZSS3 439 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 HFE2Q6ZVN8 426 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 MARCH9Q86YJ5 346 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 DBF4BQ8NFT6 615 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 NEIL3Q8TAT5 605 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 KAT2AQ92830 837 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TCEAL4Q96EI5 215 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TSSK3Q96PN8 268 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZFP57Q9NU63 452 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 AKAP7Q9P0M2 348 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 AFF4Q9UHB7 1163 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 MYLKQ15746 1914 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 A0A1W2PPE3 182 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TLR4O00206 839 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 CLIC1O00299 241 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PRAMEF2O60811 474 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 EIF4EP06730 217 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF286BP0CG31 522 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PIPP12273 146 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 CALCRP30988 508 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SEC61A1P61619 476 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SLC36A2Q495M3 483 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 MPZL3Q6UWV2 235 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 QSOX2Q6ZRP7 698 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SAMD12Q8N8I0 201 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 AQP11Q8NBQ7 271 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PLA2G15Q8NCC3 412 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 FAM46DQ8NEK8 389 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 HMGB4Q8WW32 186 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SLC6A18Q96N87 628 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZFP3Q96NJ6 502 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 FCRL5Q96RD9 977 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 RNF32Q9H0A6 362 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 RBM22Q9NW64 420 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PPP1R14DQ9NXH3 145 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 FKBPLQ9UIM3 349 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 DMRT1Q9Y5R6 373 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 CD8B2A6NJW9 211 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 RHPN2P1A8MT19 583 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 AGAP14A8MT82 685 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 UBE2CO00762 179 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 DVL2O14641 736 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 OIP5O43482 229 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TSPAN3O60637 253 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SOD1P00441 154 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 HLA-DQB2P05538 268 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 CD8BP10966 210 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ODC1P11926 461 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 CASP9P55211 416 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TAS2R60P59551 318 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SPCS3P61009 180 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PURAQ00577 322 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 GINS1Q14691 196 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 IRF4Q15306 451 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TARBP2Q15633 366 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 PTOV1Q86YD1 416 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 KLBQ86Z14 1044 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 DCUN1D3Q8IWE4 304 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 CHTF18Q8WVB6 975 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 POP5Q969H6 163 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 MRPL38Q96DV4 380 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TMEM41AQ96HV5 264 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF382Q96SR6 550 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 OR10A4Q9H209 315 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SARS2Q9NP81 518 aaKnown RBP11.88□□□□□ -0.51
CTCFL-218ENST00000608440 FLRT1Q9NZU1 646 aa11.88□□□□□ -0.51
CTCFL-218ENST00000608440 SLC19A2O60779 497 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CSF2RBP32927 897 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 TRHRP34981 398 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-218ENST00000608440 SOX18P35713 384 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 NPBWR1P48145 328 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CRYBA2P53672 197 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CRISP1P54107 249 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ACY1Q03154 408 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 ITKQ08881 620 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 DEFB115Q30KQ5 88 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 CRB2Q5IJ48 1285 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 TMEM255AQ5JRV8 349 aa11.87□□□□□ -0.51
CTCFL-218ENST00000608440 DHRS7BQ6IAN0 325 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms