RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 CNIH2Q6PI25 160 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 DCUN1D3Q8IWE4 304 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 METTL27Q8N6F8 245 aaPredicted RBP9.81□□□□□ -0.84
CTCFL-216ENST00000608263 PHOSPHO2Q8TCD6 241 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 ZNF689Q96CS4 500 aaPredicted RBP9.81□□□□□ -0.84
CTCFL-216ENST00000608263 CDADC1Q9BWV3 514 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 SLIRPQ9GZT3 109 aaKnown RBP9.81□□□□□ -0.84
CTCFL-216ENST00000608263 CEP350Q5VT06 3117 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 SMLR1H3BR10 107 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 LAMTOR5O43504 91 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 OR2B3O76000 313 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 CD160O95971 181 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 ZFP36L2P47974 494 aaKnown RBP9.81□□□□□ -0.84
CTCFL-216ENST00000608263 ARRB1P49407 418 aaPredicted RBP9.81□□□□□ -0.84
CTCFL-216ENST00000608263 BLKP51451 505 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 PGDP52209 483 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 CST6Q15828 149 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 NDUFAF5Q5TEU4 345 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 MLIPQ5VWP3 458 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 BICRALQ6AI39 1079 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 DEFB123Q8N688 67 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 FKBP10Q96AY3 582 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 YIPF6Q96EC8 236 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 GAL3ST4Q96RP7 486 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 BCL7BQ9BQE9 202 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 DPH7Q9BTV6 452 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 TMEM184CQ9NVA4 438 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 ZNF639Q9UID6 485 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 IKZF2Q9UKS7 526 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 SLC6A14Q9UN76 642 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 SNX11Q9Y5W9 270 aa9.81□□□□□ -0.84
CTCFL-216ENST00000608263 A0A1W2PRG6 482 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 I3L521 148 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 K7ESM1 405 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 HPGDSO60760 199 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 GPX5O75715 221 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 RPP14O95059 124 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 WISP3O95389 354 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 POLR2CP19387 275 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 CD22P20273 847 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 ITPKBP27987 946 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 GCGRP47871 477 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 MRPL58Q14197 206 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 NNATQ16517 81 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PRPF38BQ5VTL8 546 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 SLCO4C1Q6ZQN7 724 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 MSANTD1Q6ZTZ1 278 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 LINGO2Q7L985 606 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 NRMQ8IXM6 262 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 COX18Q8N8Q8 333 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 OR4C6Q8NH72 309 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 ABCG5Q9H222 651 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 SLC52A3Q9NQ40 469 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 CA5BQ9Y2D0 317 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 WDR45Q9Y484 360 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 CUL9Q8IWT3 2517 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 FZD6O60353 706 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 C1orf105O95561 183 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 HMGN2P05204 90 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 TAP2Q03519 686 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 ST3GAL3Q11203 375 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 KHDRBS2Q5VWX1 349 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 SLC36A4Q6YBV0 504 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PARS2Q7L3T8 475 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 SPRED2Q7Z698 418 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 TDHQ8IZJ6 230 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 ZNF514Q96K75 400 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 NRTNQ99748 197 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 OR2B2Q9GZK3 357 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 CWH43Q9H720 699 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 IL21RQ9HBE5 538 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 DKK3Q9UBP4 350 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PCDHGA2Q9Y5H1 932 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 NPIPA5A0A0B4J1W7 369 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 TRIM64CA6NLI5 447 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 RIIAD1A6NNX1 92 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 SOBPA7XYQ1 873 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 NPIPA7E9PJI5 369 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 M0R082 166 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 SRPRAP08240 638 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 NPIPA8P0DM63 369 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PCSK2P16519 638 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 DRD5P21918 477 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PCMT1P22061 227 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 HOXA9P31269 272 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 EIF4EBP2Q13542 120 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PLBD1Q6P4A8 553 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 FRRS1Q6ZNA5 592 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 ADGRD2Q7Z7M1 963 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 ASB15Q8WXK1 588 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 CHFRQ96EP1 664 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 BRD7Q9NPI1 651 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 TEX10Q9NXF1 929 aaPredicted RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 HCN2Q9UL51 889 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
CTCFL-216ENST00000608263 PPIEQ9UNP9 301 aaKnown RBP9.8□□□□□ -0.84
CTCFL-216ENST00000608263 URADA6NGE7 173 aa9.79□□□□□ -0.84
CTCFL-216ENST00000608263 YY2O15391 372 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms