RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PRAMEF27A3QJZ7 478 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 HNRNPCL2B2RXH8 293 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 HNRNPCL3B7ZW38 293 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 NME6O75414 186 aaPredicted RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 RECKO95980 971 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 LDLRP01130 860 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 HEXBP07686 556 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 HNRNPCL4P0DMR1 293 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 ACP2P11117 423 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 ZNF28P17035 718 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 ITIH1P19827 911 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 SSTR4P31391 388 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 CRYBA2P53672 197 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 MAPK11Q15759 364 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 DUSP5Q16690 384 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 MLIPQ5VWP3 458 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 WDR53Q7Z5U6 358 aaPredicted RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 AMIGO2Q86SJ2 522 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 PTPMT1Q8WUK0 201 aaPredicted RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 CDS1Q92903 461 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 DAZLQ92904 295 aaKnown RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 CENPNQ96H22 339 aaPredicted RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 BTBD2Q9BX70 525 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 SLC26A1Q9H2B4 701 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 SEMA6AQ9H2E6 1030 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 GPN3Q9UHW5 284 aaPredicted RBP16.77■□□□□ 0.28
VRK3-225ENST00000601912 BAG5Q9UL15 447 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 KCNE3Q9Y6H6 103 aa16.77■□□□□ 0.28
VRK3-225ENST00000601912 NUP210LQ5VU65 1888 aa16.77■□□□□ 0.27
VRK3-225ENST00000601912 COL27A1Q8IZC6 1860 aaPredicted RBP16.77■□□□□ 0.27
VRK3-225ENST00000601912 PCNX2A6NKB5 2137 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 VSTM2BA6NLU5 285 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 DEAF1O75398 565 aaPredicted RBP16.76■□□□□ 0.27
VRK3-225ENST00000601912 MT-ND1P03886 318 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 OPN1SWP03999 348 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 ETS2P15036 469 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 ATP6AP1Q15904 470 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 NKG7Q16617 165 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 HEPHL1Q6MZM0 1159 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 VTCN1Q7Z7D3 282 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 CATSPER1Q8NEC5 780 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 DEFB124Q8NES8 71 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 GPR151Q8TDV0 419 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 METTL21AQ8WXB1 218 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 ART5Q96L15 291 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 TAAR9Q96RI9 348 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 BDH2Q9BUT1 245 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 OR10A5Q9H207 317 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 PRODH2Q9UF12 536 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 NXT1Q9UKK6 140 aaKnown RBP16.76■□□□□ 0.27
VRK3-225ENST00000601912 HEMK1Q9Y5R4 338 aaPredicted RBP16.76■□□□□ 0.27
VRK3-225ENST00000601912 SPEGQ15772 3267 aa16.76■□□□□ 0.27
VRK3-225ENST00000601912 CCDC187A0A096LP49 1063 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 TTC36A6NLP5 189 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 A8MUA0 341 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 A8MVJ9 347 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 HRKO00198 91 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CLOCKO15516 846 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 H6PDO95479 791 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 AK1P00568 194 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CHRM4P08173 479 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 EMDP50402 254 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 FUT5Q11128 374 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 LRRC36Q1X8D7 754 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 ARHGAP11BQ3KRB8 267 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 EXOSC6Q5RKV6 272 aaKnown RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 HES3Q5TGS1 186 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 LPCAT4Q643R3 524 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 HMBOX1Q6NT76 420 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 SHISA6Q6ZSJ9 500 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 ARMC8Q8IUR7 673 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 ZDHHC21Q8IVQ6 265 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 COX18Q8N8Q8 333 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 OR14A16Q8NHC5 309 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 MR1Q95460 341 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 SENP5Q96HI0 755 aaPredicted RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 FBXL20Q96IG2 436 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 COL21A1Q96P44 957 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 TACO1Q9BSH4 297 aaKnown RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 LMF2Q9BU23 707 aaKnown RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 DDA1Q9BW61 102 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 SOX17Q9H6I2 414 aaPredicted RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 FOLH1BQ9HBA9 442 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 IL1RAPQ9NPH3 570 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 SEC14L3Q9UDX4 400 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 PISDQ9UG56 409 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 SATB2Q9UPW6 733 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 B3GALT1Q9Y5Z6 326 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 IDSB3KWA1 339 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 C9J4A7 227 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 PROB1E7EW31 1015 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 PLD2O14939 933 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 MFN2O95140 757 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CST1P01037 141 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 FABP3P05413 133 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CYC1P08574 325 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 PEX2P28328 305 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 GABRA3P34903 492 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 MAP3K8P41279 467 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 LIMK1P53667 647 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms