RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CTAGE8P0CG41 777 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 CNTFP26441 200 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 GFRA1P56159 465 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 DCAF7P61962 342 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 TRA2BP62995 288 aaKnown RBP16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 ADAM8P78325 824 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 PLCXD2Q0VAA5 305 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 ZNF628Q5EBL2 1059 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 C8orf74Q6P047 294 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 CAMKMTQ7Z624 323 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 KIF18BQ86Y91 864 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 CTAGE4Q8IX94 777 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 C1orf52Q8N6N3 182 aaKnown RBP16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 DCAKDQ8WVC6 231 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 RNF138Q8WVD3 245 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 KLHL29Q96CT2 875 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 PAFAH2Q99487 392 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 MRPL46Q9H2W6 279 aaKnown RBP16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 EHD3Q9NZN3 535 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 TRPS1Q9UHF7 1281 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 MAPRE3Q9UPY8 281 aa16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHMP2A-208ENST00000601220 PRAMEF25A6NGN4 478 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 FRG2CA6NGY1 282 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 RCBTB2O95199 551 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 INHBAP08476 426 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 TMIGD3P0DMS9 266 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 CT45A8P0DMV1 189 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 CT45A9P0DMV2 189 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 ECHS1P30084 290 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 HSD17B3P37058 310 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 SERPINB9P50453 376 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 HMGCS1Q01581 520 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 CT45A2Q5DJT8 189 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 TCHHL1Q5QJ38 904 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 PLXDC2Q6UX71 529 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 TRIM42Q8IWZ5 723 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 ZNF675Q8TD23 568 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 TMBIM1Q969X1 311 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 HBEGFQ99075 208 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 GSX1Q9H4S2 264 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 ANKRA2Q9H9E1 313 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 PRODH2Q9UF12 536 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 DMGDHQ9UI17 866 aaKnown RBP16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 PSME2Q9UL46 239 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 SNX6Q9UNH7 406 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 ABCA4P78363 2273 aa16.35■□□□□ 0.21
CHMP2A-208ENST00000601220 NIPBLQ6KC79 2804 aaeCLIP16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 A0A1W2PPR1 153 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 OR6C70A6NIJ9 312 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 TRIM49D1C9J1S8 452 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 EEF1E1-BLOC1S5C9J1V9 151 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 MANBAO00462 879 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 EEF1E1O43324 174 aaKnown RBP16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 NME6O75414 186 aaPredicted RBP16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 OR4F21O95013 312 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 CYP4B1P13584 511 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 CHN1P15882 459 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 STARP49675 285 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 LHX2P50458 406 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 RAE1P78406 368 aaKnown RBP16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 RCAN2Q14206 197 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 UNC50Q53HI1 259 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 CCDC116Q8IYX3 515 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 SLC35A4Q96G79 324 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 BTBD9Q96Q07 612 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 SFXN3Q9BWM7 321 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 KLRF1Q9NZS2 232 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 CLCF1Q9UBD9 225 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 VPS29Q9UBQ0 182 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 FBXL2Q9UKC9 423 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 UTS2RQ9UKP6 389 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 EDARQ9UNE0 448 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 EXPH5Q8NEV8 1989 aa16.34■□□□□ 0.21
CHMP2A-208ENST00000601220 MED12Q93074 2177 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 ZIC3O60481 467 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 TSPAN2O60636 221 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 RAF1P04049 648 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 HRGP04196 525 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 FOSL1P15407 271 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 DGKQP52824 942 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 GAS1P54826 345 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 CLDN18P56856 261 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 PPP2R2AP63151 447 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 CLCQ05315 142 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 DEFB113Q30KQ7 82 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 PLCZ1Q86YW0 608 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 OR14L1PQ8NHC6 308 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 RDH11Q8TC12 318 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 WNT2BQ93097 391 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 C11orf24Q96F05 449 aaPredicted RBP16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 VSTM2LQ96N03 204 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 ZFP3Q96NJ6 502 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 DACH2Q96NX9 599 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 COL21A1Q96P44 957 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 FAIM2Q9BWQ8 316 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 RBM24Q9BX46 236 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms