RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SCAMP2O15127 329 aaKnown RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 HS6ST1O60243 411 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SUSD5O60279 629 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SLC19A2O60779 497 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SCN2BO60939 215 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 CRCPO75575 148 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 PPM1BO75688 479 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 RFPL3SP0C7P2 107 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 BGNP21810 368 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 PIGAP37287 484 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 CASP3P42574 277 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ASMTP46597 345 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SLC1A6P48664 564 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 DNASE1L1P49184 302 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 RPL14P50914 215 aaKnown RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 FBXW4P57775 412 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 MAGOHP61326 146 aaKnown RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 RPL38P63173 70 aaKnown RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 PSPHP78330 225 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 OCRLQ01968 901 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 EMX2Q04743 252 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 RBPJQ06330 500 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SNTA1Q13424 505 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 TBCELQ5QJ74 424 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 C1QL3Q5VWW1 255 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 OGFOD2Q6N063 350 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 TMEM64Q6YI46 380 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 FJX1Q86VR8 437 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 FAM9CQ8IZT9 166 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 KIRREL3Q8IZU9 778 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 GHDCQ8N2G8 530 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 TMEM251Q8N6I4 163 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 KAT2AQ92830 837 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ARL8AQ96BM9 186 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 TSSK3Q96PN8 268 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 GAL3ST4Q96RP7 486 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 DMRTA2Q96SC8 542 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 BRINP2Q9C0B6 783 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 TSPAN10Q9H1Z9 355 aaPredicted RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ZNF703Q9H7S9 590 aaPredicted RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 AKTIPQ9H8T0 292 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 VIPAS39Q9H9C1 493 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 MEAF6Q9HAF1 191 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 FOLH1BQ9HBA9 442 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ZFP64Q9NPA5 681 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ACKR4Q9NPB9 350 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 SIRT3Q9NTG7 399 aaPredicted RBP8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ENTPD4Q9Y227 616 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 NOTCH2Q04721 2471 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 AKAP9Q99996 3911 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 ABCA12Q86UK0 2595 aa8.06□□□□□ -1.12
SSBP4-208ENST00000600628 PKDREJQ9NTG1 2253 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ATP6AP2A0A1C7CYW4 349 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 WDR91A4D1P6 747 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 OR14I1A6ND48 311 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 TTC36A6NLP5 189 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 CAPN14A8MX76 684 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ABCB7O75027 752 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PEX11AO75192 247 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 UGT2B11O75310 529 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 NME6O75414 186 aaPredicted RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ERN1O75460 977 aaKnown RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ATP6AP2O75787 350 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 CLDN1O95832 211 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 P04436 131 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PRPS2P11908 318 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ENDOUP21128 410 aaKnown RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 RFC3P40938 356 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 MC3RP41968 323 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 TMED10P49755 219 aaKnown RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PNLIPRP2P54317 469 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 WNT3P56703 355 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 NRG3P56975 720 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 CORO7P57737 925 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 STX3Q13277 289 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PTGR1Q14914 329 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 C3AR1Q16581 482 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 GALNTL6Q49A17 601 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ATP6AP1LQ52LC2 224 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 IL23RQ5VWK5 629 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 BICRALQ6AI39 1079 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 MAMDC2Q7Z304 686 aaPredicted RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ZNF551Q7Z340 670 aaPredicted RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 NUP54Q7Z3B4 507 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 DOLPP1Q86YN1 238 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 DDIASQ8IXT1 998 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 SLC34A3Q8N130 599 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 LIX1Q8N485 282 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 ACBD4Q8NC06 268 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 FAM110BQ8TC76 370 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PHF10Q8WUB8 498 aaKnown RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 CIDECQ96AQ7 238 aaPredicted RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 TMEM41AQ96HV5 264 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 MAELQ96JY0 434 aaKnown RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 BBS4Q96RK4 519 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 LMF2Q9BU23 707 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms