RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ATP6V1B1P15313 513 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 ALAS2P22557 587 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 PTGER1P34995 402 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 STT3AP46977 705 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 KCNJ5P48544 419 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 TUBA4AP68366 448 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 MGAT2Q10469 447 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 SYPL1Q16563 259 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 RNF220Q5VTB9 566 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 FAHD1Q6P587 224 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 GALNT12Q8IXK2 581 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 MUS81Q96NY9 551 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 DGAT2Q96PD7 388 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 ALOXE3Q9BYJ1 711 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 AMBRA1Q9C0C7 1298 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 ZNF304Q9HCX3 659 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 SEC14L3Q9UDX4 400 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 ATXN7L1Q9ULK2 861 aaPredicted RBP18.73■□□□□ 0.59
PNKP-214ENST00000600573 FAM32AQ9Y421 112 aaKnown RBP18.73■□□□□ 0.59
PNKP-214ENST00000600573 TESMINQ9Y4I5 508 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 LYVE1Q9Y5Y7 322 aa18.73■□□□□ 0.59
PNKP-214ENST00000600573 CCDC88CQ9P219 2028 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 PI4KAP42356 2102 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 PCDH15Q96QU1 1955 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 IGHV5-10-1A0A0J9YXX1 117 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 SMIM31A0A1B0GVY4 71 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 CASC3O15234 703 aaKnown RBP18.72■□□□□ 0.59
PNKP-214ENST00000600573 HBQ1P09105 142 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 ALOX5P09917 674 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 XCR1P46094 333 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 OR1E2P47887 323 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 RPS6KA3P51812 740 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 NR1H2P55055 460 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 HPCAP84074 193 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 ID2Q02363 134 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 LAPTM4AQ15012 233 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 GPAT3Q53EU6 434 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 TRMT12Q53H54 448 aaKnown RBP18.72■□□□□ 0.59
PNKP-214ENST00000600573 PLA2G2CQ5R387 149 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 EXOSC6Q5RKV6 272 aaKnown RBP18.72■□□□□ 0.59
PNKP-214ENST00000600573 FAM111BQ6SJ93 734 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 C16orf62Q7Z3J2 963 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 THAP5Q7Z6K1 395 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 VWA5B2Q8N398 1253 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 ATG16L2Q8NAA4 619 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 PIK3C3Q8NEB9 887 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 RIT1Q92963 219 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 ZNF354BQ96LW1 612 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 GFM1Q96RP9 751 aaKnown RBP18.72■□□□□ 0.59
PNKP-214ENST00000600573 PIP5K1AQ99755 562 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 YIPF4Q9BSR8 244 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 ING2Q9H160 280 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 CXorf21Q9HAI6 301 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 CACYBPQ9HB71 228 aaKnown RBP18.72■□□□□ 0.59
PNKP-214ENST00000600573 TUBA8Q9NY65 449 aaPredicted RBP18.72■□□□□ 0.59
PNKP-214ENST00000600573 NDOR1Q9UHB4 597 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 SATB2Q9UPW6 733 aa18.72■□□□□ 0.59
PNKP-214ENST00000600573 A0A087WXM4 84 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 PRAMEF27A3QJZ7 478 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 SLC16A6O15403 523 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 FLRT2O43155 660 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 UGT2B11O75310 529 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 JRKO75564 520 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 TFAP2AP05549 437 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 GUSBP08236 651 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 PABPC4LP0CB38 370 aaKnown RBP18.71■□□□□ 0.59
PNKP-214ENST00000600573 PIGAP37287 484 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 DAPP51397 102 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 MAT1AQ00266 395 aaKnown RBP18.71■□□□□ 0.59
PNKP-214ENST00000600573 ARHGAP11BQ3KRB8 267 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 FOXB2Q5VYV0 432 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 OR4C15Q8NGM1 316 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 GIPC3Q8TF64 312 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 HOXB13Q92826 284 aaPredicted RBP18.71■□□□□ 0.59
PNKP-214ENST00000600573 SLC35A4Q96G79 324 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 COL21A1Q96P44 957 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 MTHFD2LQ9H903 347 aaPredicted RBP18.71■□□□□ 0.59
PNKP-214ENST00000600573 EQTNQ9NQ60 294 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 KRT84Q9NSB2 600 aa18.71■□□□□ 0.59
PNKP-214ENST00000600573 LOC100130705A0A1B0GUX0 176 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 TRIM64A6NGJ6 449 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 PRAMEF25A6NGN4 478 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 NTN3O00634 580 aaPredicted RBP18.71■□□□□ 0.58
PNKP-214ENST00000600573 BCKDKO14874 412 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 LDOC1O95751 146 aaPredicted RBP18.71■□□□□ 0.58
PNKP-214ENST00000600573 FESP07332 822 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 RHCEP18577 417 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 FBLP22087 321 aaKnown RBP18.71■□□□□ 0.58
PNKP-214ENST00000600573 LPAL2Q16609 132 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 AP1ARQ63HQ0 302 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 LAIR1Q6GTX8 287 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 RHBDD2Q6NTF9 364 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 QSOX2Q6ZRP7 698 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 CYP4Z1Q86W10 505 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 CHDHQ8NE62 594 aaPredicted RBP18.71■□□□□ 0.58
PNKP-214ENST00000600573 OR2I1PQ8NGU4 316 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 APOBEC4Q8WW27 367 aaKnown RBP18.71■□□□□ 0.58
PNKP-214ENST00000600573 PINK1Q9BXM7 581 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 GRIP2Q9C0E4 1043 aa18.71■□□□□ 0.58
PNKP-214ENST00000600573 RIBC2Q9H4K1 309 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms