RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ZFP28Q8NHY6 868 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 PIWIL2Q8TC59 973 aaKnown RBP13.99□□□□□ -0.17
LIG1-219ENST00000600055 COQ8BQ96D53 544 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 HSPBAP1Q96EW2 488 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 GPR137Q96N19 417 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 BTBD9Q96Q07 612 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 FAM173AQ9BQD7 235 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 ACSS1Q9NUB1 689 aaPredicted RBP13.99□□□□□ -0.17
LIG1-219ENST00000600055 INTS9Q9NV88 658 aaKnown RBP13.99□□□□□ -0.17
LIG1-219ENST00000600055 TUBA8Q9NY65 449 aaPredicted RBP13.99□□□□□ -0.17
LIG1-219ENST00000600055 SEC14L3Q9UDX4 400 aa13.99□□□□□ -0.17
LIG1-219ENST00000600055 A0A1W2PRB8 838 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 TRPC5OSA6NMA1 111 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 FAM166BA8MTA8 275 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 CAPN14A8MX76 684 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 SLCO1B7G3V0H7 640 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 TO15178 435 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 ACOX3O15254 700 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 HS6ST1O60243 411 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 PPM1BO75688 479 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 NME5P56597 212 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 C21orf58P58505 322 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 HSF1Q00613 529 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 PSG6Q00889 435 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 PLGLB1Q02325 96 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 PLCXD2Q0VAA5 305 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 RPS6KA2Q15349 733 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 PGS1Q32NB8 556 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 HSP90B2PQ58FF3 399 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 OGFOD2Q6N063 350 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 SLC34A3Q8N130 599 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 POGLUT1Q8NBL1 392 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 OR52N2Q8NGI0 321 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 SPPL2AQ8TCT8 520 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 TMBIM1Q969X1 311 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 TTTY12Q9BZ98 90 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 EQTNQ9NQ60 294 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 SIRT3Q9NTG7 399 aaPredicted RBP13.98□□□□□ -0.17
LIG1-219ENST00000600055 OSGIN2Q9Y236 505 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 RELNP78509 3460 aa13.98□□□□□ -0.17
LIG1-219ENST00000600055 TP53I11O14683 189 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 TFECO14948 347 aaPredicted RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 ANKRD28O15084 1053 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 ASNA1O43681 348 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 UGT2B11O75310 529 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 SEMA7AO75326 666 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 REM1O75628 298 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 C6orf47O95873 294 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 DDX5P17844 614 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 TMED10P49755 219 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 PRKAG1P54619 331 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 PPIAP62937 165 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 FOXO1Q12778 655 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 NXNQ6DKJ4 435 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 OR4F3Q6IEY1 312 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 GK5Q6ZS86 529 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 SZRD1Q7Z422 152 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 LRRC34Q8IZ02 419 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 NUP43Q8NFH3 380 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 CKAP2Q8WWK9 683 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 DIO2Q92813 273 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 HGDQ93099 445 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 MAELQ96JY0 434 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 MARK4Q96L34 752 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 TEX37Q96LM6 180 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 C7orf26Q96N11 449 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 OR52B2Q96RD2 323 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 NODALQ96S42 347 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 PRPF18Q99633 342 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 DUSP26Q9BV47 211 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 DPY30Q9C005 99 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 DEFB127Q9H1M4 99 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 CNIH4Q9P003 139 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 USH1CQ9Y6N9 552 aa13.97□□□□□ -0.17
LIG1-219ENST00000600055 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 GCN1Q92616 2671 aaKnown RBP13.97□□□□□ -0.17
LIG1-219ENST00000600055 NBASA2RRP1 2371 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 C9JVG2 144 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 PDE9AO76083 593 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 GLSO94925 669 aaPredicted RBP13.96□□□□□ -0.17
LIG1-219ENST00000600055 IFI6P09912 130 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 NAGAP17050 411 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 CASP3P42574 277 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 WNT3P56703 355 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 UFM1P61960 85 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 KCNJ2P63252 427 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 GAB1Q13480 694 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 MLC1Q15049 377 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 CMPK2Q5EBM0 449 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 TMEM198Q66K66 360 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 NUP54Q7Z3B4 507 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 SPATA19Q7Z5L4 167 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 CAMKMTQ7Z624 323 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 TMEM251Q8N6I4 163 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 FBXO30Q8TB52 745 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 OR5P2Q8WZ92 322 aa13.96□□□□□ -0.17
LIG1-219ENST00000600055 FAM120BQ96EK7 910 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms