RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TRBV5-3	A0A0A0MS03	114 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	CLIC1	O00299	241 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	PRAMEF2	O60811	474 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	CBX7	O95931	251 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	HOXB9	P17482	250 aa	Predicted RBP	20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	S1PR1	P21453	382 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	SSTR4	P31391	388 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	PSME3	P61289	254 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	EXOSC7	Q15024	291 aa	Known RBP	20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	ZSCAN26	Q16670	478 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	CRB2	Q5IJ48	1285 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	SAXO2	Q658L1	398 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	H3F3C	Q6NXT2	135 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	RNF111	Q6ZNA4	994 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	RINL	Q6ZS11	566 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	MSRB3	Q8IXL7	192 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	OR52R1	Q8NGF1	315 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	NEURL3	Q96EH8	262 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	ABHD17A	Q96GS6	310 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	SLC35G5	Q96KT7	338 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	MS4A4E	Q96PG1	132 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	DEFB126	Q9BYW3	111 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	OR10A5	Q9H207	317 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	C1orf21	Q9H246	121 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	SLC25A37	Q9NYZ2	338 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026	TUBD1	Q9UJT1	453 aa		20.36	■□□□□ 0.85
LTBP4-227	ENST00000600026		A8MUI8	341 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	FXYD1	O00168	92 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	PRKN	O60260	465 aa	Predicted RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	PRIM2	P49643	509 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	SLC25A3	Q00325	362 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	AGAP7P	Q5VUJ5	663 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	FCRLB	Q6BAA4	426 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	NANOGP8	Q6NSW7	305 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	HSDL2	Q6YN16	418 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	PGAM4	Q8N0Y7	254 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	CLEC4F	Q8N1N0	589 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	RBM15B	Q8NDT2	890 aa	Known RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	OR8J3	Q8NGG0	315 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	AURKB	Q96GD4	344 aa	Predicted RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	AGAP4	Q96P64	663 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	UBL7	Q96S82	380 aa	Predicted RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	SMAD5	Q99717	465 aa	Known RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	THUMPD3	Q9BV44	507 aa	Known RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	ANKRA2	Q9H9E1	313 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	NANOG	Q9H9S0	305 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	PRODH2	Q9UF12	536 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	FAF1	Q9UNN5	650 aa	Predicted RBP	20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	TP53TG5	Q9Y2B4	290 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	AP3M1	Q9Y2T2	418 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026	L3MBTL1	Q9Y468	752 aa		20.35	■□□□□ 0.85
LTBP4-227	ENST00000600026		K7EM74	188 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	ZFAND5	O76080	213 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	PDGFA	P04085	211 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	ANXA11	P50995	505 aa	Known RBP	20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	SLC37A1	P57057	533 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	RNF4	P78317	190 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	C9orf40	Q8IXQ3	194 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	SLC5A8	Q8N695	610 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	SIMC1	Q8NDZ2	872 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	OR8K3	Q8NH51	312 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	FBXO27	Q8NI29	283 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	C9orf43	Q8TAL5	461 aa	Predicted RBP	20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	CPPED1	Q9BRF8	314 aa	Predicted RBP	20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	GPATCH1	Q9BRR8	931 aa	Known RBP	20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	SLC39A3	Q9BRY0	314 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	EPS8L2	Q9H6S3	715 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	GMEB1	Q9Y692	573 aa		20.34	■□□□□ 0.85
LTBP4-227	ENST00000600026	OR6C76	A6NM76	312 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	GYG2	O15488	501 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	MAN1A2	O60476	641 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ALPP	P05187	535 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	HMGN2	P05204	90 aa	Known RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	MAGEA8	P43361	318 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	TXNL4A	P83876	142 aa	Known RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ZNF155	Q12901	538 aa	Predicted RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	DUSP8	Q13202	625 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	MFAP5	Q13361	173 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	DNAL1	Q4LDG9	190 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	LACTB2	Q53H82	288 aa	Predicted RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	TCTN3	Q6NUS6	607 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	C8orf82	Q6P1X6	216 aa	Predicted RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ZCCHC12	Q6PEW1	402 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ISLR2	Q6UXK2	745 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	LINC00696	Q6ZRV3	163 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	YTHDF3	Q7Z739	585 aa	Known RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	DEFB107A	Q8IZN7	70 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ZNF615	Q8N8J6	731 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	OR52N2	Q8NGI0	321 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	PNPT1	Q8TCS8	783 aa	Known RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	THAP3	Q8WTV1	239 aa	Predicted RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	WBP1	Q96G27	269 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	BTBD10	Q9BSF8	475 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ACTRT3	Q9BYD9	372 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	CDCP1	Q9H5V8	836 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	ZBTB20	Q9HC78	741 aa	Predicted RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	EQTN	Q9NQ60	294 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	TAS2R1	Q9NYW7	299 aa		20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	HEMK1	Q9Y5R4	338 aa	Predicted RBP	20.33	■□□□□ 0.85
LTBP4-227	ENST00000600026	TMEM200C	A6NKL6	621 aa		20.32	■□□□□ 0.84

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms