RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 UTS2RQ9UKP6 389 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 ACAD8Q9UKU7 415 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 BOKQ9UMX3 212 aaPredicted RBP12.62□□□□□ -0.39
SCAF1-203ENST00000598359 PLLPQ9Y342 182 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 FAM215AQ9Y5M1 114 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF780BQ9Y6R6 833 aa12.62□□□□□ -0.39
SCAF1-203ENST00000598359 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 AQP7O14520 342 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 TP53I11O14683 189 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 BCKDKO14874 412 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 SUSD5O60279 629 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 PLIN3O60664 434 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 TRIM3O75382 744 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-203ENST00000598359 SPAG7O75391 227 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 ACVR2AP27037 513 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 GDF1P27539 372 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 ABCD3P28288 659 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 TIA1P31483 386 aaKnown RBP eCLIP12.61□□□□□ -0.39
SCAF1-203ENST00000598359 NRG3P56975 720 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 TRA2BP62995 288 aaKnown RBP12.61□□□□□ -0.39
SCAF1-203ENST00000598359 ACSM2AQ08AH3 577 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 PRSS53Q2L4Q9 553 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 SPDYAQ5MJ70 313 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 ACSM2BQ68CK6 577 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 RTL6Q6ICC9 239 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 TMEM211Q6ICI0 200 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 FRMD7Q6ZUT3 714 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF295-AS1Q8N0V1 137 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 LRRC25Q8N386 305 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-203ENST00000598359 GBP7Q8N8V2 638 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-203ENST00000598359 CCDC63Q8NA47 563 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 SPPL2AQ8TCT8 520 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 MGARPQ8TDB4 240 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 RND1Q92730 232 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF597Q96LX8 424 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 PSME2Q9UL46 239 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 CACNA1CQ13936 2221 aa12.61□□□□□ -0.39
SCAF1-203ENST00000598359 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 GNB5O14775 395 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 ABCB1P08183 1280 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-203ENST00000598359 ANXA4P09525 319 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-203ENST00000598359 GLI4P10075 376 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 CASP3P42574 277 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 ETV4P43268 484 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 EMDP50402 254 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 SPIN4Q56A73 249 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 ZNF628Q5EBL2 1059 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 FNDC7Q5VTL7 733 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 TMEM198Q66K66 360 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 OR10Q1Q8NGQ4 319 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 CTHRC1Q96CG8 243 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 GNRHR2Q96P88 292 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 NODALQ96S42 347 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 TTYH2Q9BSA4 534 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 ANGPTL4Q9BY76 406 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 PTGDR2Q9Y5Y4 395 aa12.6□□□□□ -0.39
SCAF1-203ENST00000598359 TACC2O95359 2948 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 PKDREJQ9NTG1 2253 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 FIGNL2A6NMB9 653 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 KDM4EB2RXH2 506 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-203ENST00000598359 COPEO14579 308 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 SNX3O60493 162 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 HCN1O60741 890 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CRCPO75575 148 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 PPM1BO75688 479 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 TRAPPC6AO75865 159 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
SCAF1-203ENST00000598359 DRD2P14416 443 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CPA3P15088 417 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CHRNB4P30926 498 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CRHR1P34998 444 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 PTGER4P35408 488 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 ADH7P40394 386 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 MASP1P48740 699 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
SCAF1-203ENST00000598359 PLCXD2Q0VAA5 305 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 IMPG1Q17R60 797 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CCDC153Q494R4 210 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CFAP157Q5JU67 520 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 WLSQ5T9L3 541 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CLEC6AQ6EIG7 209 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 B3GNT6Q6ZMB0 384 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
SCAF1-203ENST00000598359 GDF7Q7Z4P5 450 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 LIX1Q8N485 282 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CCDC197Q8NCU1 140 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 LILRB4Q8NHJ6 448 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 TCP10LQ8TDR4 215 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 HGDQ93099 445 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 SARAFQ96BY9 339 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 OMA1Q96E52 524 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 CCDC126Q96EE4 140 aa12.59□□□□□ -0.39
SCAF1-203ENST00000598359 C11orf24Q96F05 449 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms