RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 FBXW4P57775 412 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 PSG6Q00889 435 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 RBPJQ06330 500 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 NNATQ16517 81 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 PRAMEF20Q5VT98 475 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 NPSR1Q6W5P4 371 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 SLC22A16Q86VW1 577 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 SPPL2CQ8IUH8 684 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 LRRC34Q8IZ02 419 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 SLC34A3Q8N130 599 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 FAM109AQ8N4B1 249 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 ANKRD42Q8N9B4 389 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 OR52N2Q8NGI0 321 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 CLHC1Q8NHS4 586 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 RAB3IL1Q8TBN0 382 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 GFM2Q969S9 779 aaKnown RBP14.82□□□□□ -0.04
TRIM28-213ENST00000598355 FOLH1BQ9HBA9 442 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 ACSS1Q9NUB1 689 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-213ENST00000598355 NTMQ9P121 344 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 BAIAP2L1Q9UHR4 511 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 ARHGAP21Q5T5U3 1957 aa14.82□□□□□ -0.04
TRIM28-213ENST00000598355 TP53I11O14683 189 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 TRIM3O75382 744 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 ERN1O75460 977 aaKnown RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 PRPS2P11908 318 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 RPL14P50914 215 aaKnown RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 CORO7P57737 925 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 HSF1Q00613 529 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 STX3Q13277 289 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 PTGR1Q14914 329 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 MLC1Q15049 377 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 FNDC7Q5VTL7 733 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 HHATQ5VTY9 493 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 C1QL3Q5VWW1 255 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 ANKRD26P1Q6NSI1 321 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 TMEM107Q6UX40 140 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 R3HCC1LQ7Z5L2 792 aaKnown RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 RIMKLAQ8IXN7 391 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 PRR22Q8IZ63 422 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 LIX1Q8N485 282 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 TMEM251Q8N6I4 163 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 FNDC5Q8NAU1 212 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 CIDECQ96AQ7 238 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 ARL8AQ96BM9 186 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 PPCDCQ96CD2 204 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 TUBGCP3Q96CW5 907 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 OMA1Q96E52 524 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 ELP4Q96EB1 424 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 ZBED6CLQ96FA7 236 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 SLC35A4Q96G79 324 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 MAGED4Q96JG8 741 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 SH3GL2Q99962 352 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 ANGPTL4Q9BY76 406 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 QPCTLQ9NXS2 382 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 TAS2R9Q9NYW1 312 aa14.81□□□□□ -0.04
TRIM28-213ENST00000598355 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.81□□□□□ -0.04
TRIM28-213ENST00000598355 A0A1B0GVC2 190 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 OR6C70A6NIJ9 312 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 LRRTM2O43300 516 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 AKAP10O43572 662 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 TSPAN2O60636 221 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 LRATO95237 230 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 RPL3P39023 403 aaKnown RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 PTGDSP41222 190 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 MAP3K8P41279 467 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 CASP3P42574 277 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 PPIAP62937 165 aaKnown RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 EMX2Q04743 252 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 PLCXD2Q0VAA5 305 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 MAD2L1Q13257 205 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 PDCD2Q16342 344 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 C3AR1Q16581 482 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 IL23RQ5VWK5 629 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 ZNF551Q7Z340 670 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 CAMKMTQ7Z624 323 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 ZFP28Q8NHY6 868 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 PSMA8Q8TAA3 256 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 ZNF597Q96LX8 424 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 C1orf50Q9BV19 199 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 UBQLN3Q9H347 655 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 MEAF6Q9HAF1 191 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 ZFP64Q9NPA5 681 aa14.8□□□□□ -0.04
TRIM28-213ENST00000598355 DDX18Q9NVP1 670 aaKnown RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 BOKQ9UMX3 212 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-213ENST00000598355 FAM166BA8MTA8 275 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 KLF11O14901 512 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 ABCB7O75027 752 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 UGT2B11O75310 529 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 NME6O75414 186 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-213ENST00000598355 SNX4O95219 450 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 RFPL3SP0C7P2 107 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 HPCAL1P37235 193 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 MAGEA5P43359 124 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 PER3P56645 1201 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 KCNJ2P63252 427 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 RPP38P78345 283 aaKnown RBP14.79□□□□□ -0.04
TRIM28-213ENST00000598355 OCRLQ01968 901 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 PLGLB1Q02325 96 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 SNTA1Q13424 505 aa14.79□□□□□ -0.04
TRIM28-213ENST00000598355 EXOSC6Q5RKV6 272 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms