RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 C6orf47O95873 294 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 ALDOCP09972 364 aaKnown RBP10.21□□□□□ -0.77
LIG1-211ENST00000596457 FBXO45P0C2W1 286 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 MST1P26927 711 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 KRT20P35900 424 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 PPICP45877 212 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 RFX3P48380 749 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 CORO7P57737 925 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 DCAF7P61962 342 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 EIF2S3LQ2VIR3 472 aaKnown RBP10.21□□□□□ -0.77
LIG1-211ENST00000596457 ZNF791Q3KP31 576 aaPredicted RBP10.21□□□□□ -0.77
LIG1-211ENST00000596457 SPDYE7PQ495Y7 208 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 C4orf17Q53FE4 359 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 DESI1Q6ICB0 168 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 OR4F3Q6IEY1 312 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 ACAD11Q709F0 780 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 MAVSQ7Z434 540 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 SPATA19Q7Z5L4 167 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 OR10G3Q8NGC4 313 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 DIO2Q92813 273 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 OMA1Q96E52 524 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 HSPBAP1Q96EW2 488 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 CHMP6Q96FZ7 201 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 C7orf26Q96N11 449 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 YIPF4Q9BSR8 244 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 C3orf14Q9HBI5 128 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 ASIC5Q9NY37 505 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 NPIPA1Q9UND3 350 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 OR10H1Q9Y4A9 318 aa10.21□□□□□ -0.77
LIG1-211ENST00000596457 BSNQ9UPA5 3926 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 A0A087WV62 115 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 A0A0G2JMM0 328 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 A0A1W2PPB8 328 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 A0A1W2PRS3 328 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ANKUB1A6NFN9 424 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 FRG2CA6NGY1 282 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 FAM166BA8MTA8 275 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 KIR3DP1A8MWS1 328 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 C9JVG2 144 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 PLOD2O00469 737 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 TFECO14948 347 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 EMC8O43402 210 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 CDC40O60508 579 aaKnown RBP eCLIP10.2□□□□□ -0.78
LIG1-211ENST00000596457 CBX6O95503 412 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 CPSF4O95639 269 aaKnown RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 DRD5P21918 477 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ABCD3P28288 659 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 IL12BP29460 328 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 SOAT1P35610 550 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 FRKP42685 505 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 TMED10P49755 219 aaKnown RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 KCNK10P57789 538 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 UFM1P61960 85 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 KCNJ2P63252 427 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ZNHIT3Q15649 155 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 NTRK2Q16620 822 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 LSM12Q3MHD2 195 aaKnown RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 TMEM198Q66K66 360 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 BICRALQ6AI39 1079 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 GFRALQ6UXV0 394 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 NPSR1Q6W5P4 371 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 RIMKLAQ8IXN7 391 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 SLC34A3Q8N130 599 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 OR2L13Q8N349 312 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ARFGAP2Q8N6H7 521 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 GOLM1Q8NBJ4 401 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 OR2M7Q8NG81 312 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 OR4N2Q8NGD1 307 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 CEP70Q8NHQ1 597 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 FBXO30Q8TB52 745 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 NR4A3Q92570 626 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 SLC9A6Q92581 669 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 TMBIM1Q969X1 311 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 COQ8BQ96D53 544 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ERP27Q96DN0 273 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 OTUB1Q96FW1 271 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 ZNF764Q96H86 408 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 SGCZQ96LD1 299 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 FRMD6Q96NE9 622 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 OR52B2Q96RD2 323 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ZBTB18Q99592 522 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 FAM173AQ9BQD7 235 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 BHLHE41Q9C0J9 482 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 DEFB127Q9H1M4 99 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 ACSS1Q9NUB1 689 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 AIG1Q9NVV5 245 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 TUBA8Q9NY65 449 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 SEC14L3Q9UDX4 400 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 MAPRE3Q9UPY8 281 aa10.2□□□□□ -0.78
LIG1-211ENST00000596457 GPR55Q9Y2T6 319 aaPredicted RBP10.2□□□□□ -0.78
LIG1-211ENST00000596457 SHANK1Q9Y566 2161 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 BOD1L1Q8NFC6 3051 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 C2orf72A6NCS6 295 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ASPDHA6ND91 283 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ZNF195O14628 629 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 UBDO15205 165 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ACOX3O15254 700 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ZNHIT1O43257 154 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 HS6ST1O60243 411 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 PPM1BO75688 479 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms