RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PSG6Q00889 435 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 HSPB3Q12988 150 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FNDC7Q5VTL7 733 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 SLC22A10Q63ZE4 541 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FAM47EQ6ZV65 393 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FBXW8Q8N3Y1 598 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FAM26EQ8N5C1 309 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 POGLUT1Q8NBL1 392 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 SPPL2AQ8TCT8 520 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 TMBIM1Q969X1 311 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 MTERF3Q96E29 417 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 OMA1Q96E52 524 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 NODALQ96S42 347 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 FAM173AQ9BQD7 235 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 TTTY12Q9BZ98 90 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 DEFB127Q9H1M4 99 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 SIRT3Q9NTG7 399 aaPredicted RBP10.24□□□□□ -0.77
VRK3-210ENST00000596121 ARGLU1Q9NWB6 273 aaPredicted RBP10.24□□□□□ -0.77
VRK3-210ENST00000596121 PRODH2Q9UF12 536 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 CFL2Q9Y281 166 aa10.24□□□□□ -0.77
VRK3-210ENST00000596121 ASH1LQ9NR48 2969 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 UTP20O75691 2785 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 GOLGA8QA0A0J9YX86 632 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 GOLGA8OA6NCC3 632 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 C17orf51A8MQB3 221 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 GOLGA8NF8WBI6 632 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ADAM10O14672 748 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 KLF11O14901 512 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 TSPAN2O60636 221 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 TRIM3O75382 744 aaPredicted RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 ERN1O75460 977 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 BCAS2O75934 225 aaPredicted RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 PDE9AO76083 593 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 P04436 131 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 STSP08842 583 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ALDOCP09972 364 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 EPHA3P29320 983 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 NTSP30990 170 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 MAP3K8P41279 467 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 CASP3P42574 277 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 WNT3P56703 355 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 CLDN8P56748 225 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 C21orf58P58505 322 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 PPIAP62937 165 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 PHC1P78364 1004 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 GAB1Q13480 694 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ELOAQ14241 798 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 HYAL4Q2M3T9 481 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 SMU1Q2TAY7 513 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 SLC9B1Q4ZJI4 515 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 KRTCAP3Q53RY4 240 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 EXOSC6Q5RKV6 272 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 C1QL3Q5VWW1 255 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ATG16L1Q676U5 607 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 SLC44A2Q8IWA5 706 aaPredicted RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 TMEM251Q8N6I4 163 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 FAM98AQ8NCA5 519 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 RAB3IL1Q8TBN0 382 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 HSPBAP1Q96EW2 488 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 GIMAP5Q96F15 307 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 C16orf58Q96GQ5 468 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 TEX37Q96LM6 180 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ANGPTL4Q9BY76 406 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ZDHHC11Q9H8X9 412 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 SLCO1B3Q9NPD5 702 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 PLSCR2Q9NRY7 297 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 ACSS1Q9NUB1 689 aaPredicted RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 CNIH4Q9P003 139 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 NTMQ9P121 344 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 EIF3LQ9Y262 564 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 ZNF835Q9Y2P0 537 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 LIPGQ9Y5X9 500 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.23□□□□□ -0.77
VRK3-210ENST00000596121 EXPH5Q8NEV8 1989 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 DOPEY1Q5JWR5 2465 aa10.23□□□□□ -0.77
VRK3-210ENST00000596121 NUP214P35658 2090 aaPredicted RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 MYO7BQ6PIF6 2116 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 DIDO1Q9BTC0 2240 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 GXYLT2A0PJZ3 443 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 ANKRD33BA6NCL7 494 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 WIPF3A6NGB9 483 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 B4DXG7 233 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 TFECO14948 347 aaPredicted RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 ACOX3O15254 700 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 HDAC3O15379 428 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 LRRTM2O43300 516 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 SCN2BO60939 215 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 NAGAP17050 411 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 LBPP18428 481 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 PRPS1L1P21108 318 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 HPCAL1P37235 193 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 MAGEA5P43359 124 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 MANFP55145 182 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 NRG3P56975 720 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 DCAF7P61962 342 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 PLGLB1Q02325 96 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 PLCXD2Q0VAA5 305 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms