RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 LAS2Q8IYD9 372 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 ZNF740Q8NDX6 193 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 ZNF675Q8TD23 568 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 RBPMSQ93062 196 aaKnown RBP14.53□□□□□ -0.08
PNKP-204ENST00000594661 C12orf66Q96MD2 445 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 SHARPINQ9H0F6 387 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 PPIL3Q9H2H8 161 aaKnown RBP14.53□□□□□ -0.08
PNKP-204ENST00000594661 HEXA-AS1Q9H8Q6 139 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 FGF22Q9HCT0 170 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 HRH3Q9Y5N1 445 aa14.53□□□□□ -0.08
PNKP-204ENST00000594661 PRR19A6NJB7 356 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 H0Y8X5 98 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 SMLR1H3BR10 107 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 CACNB4O00305 520 aaPredicted RBP14.52□□□□□ -0.09
PNKP-204ENST00000594661 MYL12BO14950 172 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 KHNYNO15037 678 aaKnown RBP14.52□□□□□ -0.09
PNKP-204ENST00000594661 CPSF4O95639 269 aaKnown RBP14.52□□□□□ -0.09
PNKP-204ENST00000594661 RPN2P04844 631 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 PROS1P07225 676 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 CYP4B1P13584 511 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 MYL12AP19105 171 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 RAB3AP20336 220 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 POU4F3Q15319 338 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 GLYR1Q49A26 553 aaPredicted RBP14.52□□□□□ -0.09
PNKP-204ENST00000594661 MLIPQ5VWP3 458 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 SAXO2Q658L1 398 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 LCTLQ6UWM7 567 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 ZNF621Q6ZSS3 439 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 TMEM151BQ8IW70 566 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 C7orf57Q8NEG2 295 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 OR8J2Q8NGG1 315 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 SETD7Q8WTS6 366 aaKnown RBP14.52□□□□□ -0.09
PNKP-204ENST00000594661 FAM120CQ9NX05 1096 aaKnown RBP14.52□□□□□ -0.09
PNKP-204ENST00000594661 GLS2Q9UI32 602 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 PSORS1C1Q9UIG5 152 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 CACNG2Q9Y698 323 aa14.52□□□□□ -0.09
PNKP-204ENST00000594661 WASHC1A8K0Z3 465 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CLIC1O00299 241 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 SCAMP2O15127 329 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 SCN2BO60939 215 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 TSC22D2O75157 780 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 C1QCP02747 245 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CDK1P06493 297 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CSF3P09919 207 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 LAMP1P11279 417 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 ENGP17813 658 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 GABRG2P18507 467 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 IL1RNP18510 177 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 AZGP1P25311 298 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 PSMB5P28074 263 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 PSPHP78330 225 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 SMAD4Q13485 552 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 COL28A1Q2UY09 1125 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 SPIN4Q56A73 249 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 EOGTQ5NDL2 527 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CPZQ66K79 652 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 ZNF551Q7Z340 670 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 CCDC71Q8IV32 467 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 CLECL1Q8IZS7 167 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 ENKURQ8TC29 256 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CHTF18Q8WVB6 975 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 FAM3CQ92520 227 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 MYDGFQ969H8 173 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 AHCYL2Q96HN2 611 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 TRIM45Q9H8W5 580 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 DMRT3Q9NQL9 472 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CUEDC1Q9NWM3 386 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 TAC3Q9UHF0 121 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 MMP17Q9ULZ9 603 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 SNX8Q9Y5X2 465 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 GNG14A0A1W2PPG7 69 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 PLA2G10O15496 165 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CSF2P04141 144 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 ASMTP46597 345 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 DAPP51397 102 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 C21orf58P58505 322 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 MRPL28Q13084 256 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 ARHGAP19Q14CB8 494 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 CCDC85BQ15834 202 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 TIMM50Q3ZCQ8 353 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 KLHL12Q53G59 568 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 KIAA1614Q5VZ46 1190 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 PLET1Q6UQ28 207 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 SERPINA11Q86U17 422 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 KRT73Q86Y46 540 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 TTC29Q8NA56 475 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 OR10Q1Q8NGQ4 319 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 SGTBQ96EQ0 304 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 DUSP26Q9BV47 211 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 ZNF416Q9BWM5 594 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 UBE2ZQ9H832 354 aaPredicted RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 IMP3Q9NV31 184 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 MCUBQ9NWR8 336 aa14.51□□□□□ -0.09
PNKP-204ENST00000594661 NDRG2Q9UN36 371 aaKnown RBP14.51□□□□□ -0.09
PNKP-204ENST00000594661 A0A1W2PPV9 198 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 OR52A4PA6NMU1 304 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 PRSS44E7EML9 344 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 YY2O15391 372 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 PCDHGA12O60330 932 aa14.5□□□□□ -0.09
PNKP-204ENST00000594661 MAOBP27338 520 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms