RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 MTRF1LQ9UGC7 380 aaKnown RBP3.87□□□□□ -1.79
LINC00649-204ENST00000593977 PSORS1C1Q9UIG5 152 aa3.87□□□□□ -1.79
LINC00649-204ENST00000593977 OR10H1Q9Y4A9 318 aa3.87□□□□□ -1.79
LINC00649-204ENST00000593977 KLK4Q9Y5K2 254 aa3.87□□□□□ -1.79
LINC00649-204ENST00000593977 SIRT4Q9Y6E7 314 aaPredicted RBP3.87□□□□□ -1.79
LINC00649-204ENST00000593977 RNF215Q9Y6U7 377 aa3.87□□□□□ -1.79
LINC00649-204ENST00000593977 IGSF9BQ9UPX0 1349 aa3.87□□□□□ -1.79
LINC00649-204ENST00000593977 TNRC6BQ9UPQ9 1833 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 RTTNQ86VV8 2226 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 VWA8A3KMH1 1905 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 DENND4CQ5VZ89 1909 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PLXND1Q9Y4D7 1925 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TRIP11Q15643 1979 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TRAV26-1A0A087WT03 109 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 METTL21EPA6NDL7 271 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 IQCF5A8MTL0 148 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 C12orf71A8MTZ7 269 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ARPC3O15145 178 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 MSI1O43347 362 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LCMT2O60294 686 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ACSL4O60488 711 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 BCAS1O75363 584 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ATP6AP2O75787 350 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CBR3O75828 277 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 RGS11O94810 467 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SORBS2O94875 1100 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 NFATC1O95644 943 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CPNE6O95741 557 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 GLUD1P00367 558 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LDLRP01130 860 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 IGHV2-70P01814 119 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 KRT6AP02538 564 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 OPN1LWP04000 364 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LGALS2P05162 132 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 IGFBP1P08833 259 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ALPIP09923 528 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 STAG3L2P0CL84 134 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 UMPSP11172 480 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PRPS2P11908 318 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 MX1P20591 662 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 UGT1A1P22309 533 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ACRV1P26436 265 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TRIM23P36406 574 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ALDH3B1P43353 468 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SLC9A3P48764 834 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CSNK1EP49674 416 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 COPB1P53618 953 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 UCNP55089 124 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TMPRSS3P57727 454 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SEC61GP60059 68 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CYP4F2P78329 520 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 RPP38P78345 283 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 GUCY1B3Q02153 619 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 NCBP1Q09161 790 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 GRIK2Q13002 908 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PKP1Q13835 747 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF829Q3KNS6 432 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 POM121L1PQ3SYA9 428 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZC2HC1CQ53FD0 456 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF311Q5JNZ3 666 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CELF3Q5SZQ8 465 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 MARCH8Q5T0T0 291 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SLC39A4Q6P5W5 647 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CD164L2Q6UWJ8 174 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PLXDC2Q6UX71 529 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF534Q76KX8 674 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TRPM8Q7Z2W7 1104 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LHFPL4Q7Z7J7 247 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CCDC25Q86WR0 208 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ERICH1Q86X53 443 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 NAXDQ8IW45 347 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ADGRF4Q8IZF3 695 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF444Q8N0Y2 327 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SPATA6LQ8N4H0 392 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF276Q8N554 614 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LINC01465Q8N7H1 131 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF565Q8N9K5 539 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PAPD5Q8NDF8 572 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 MCPH1Q8NEM0 835 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ENGASEQ8NFI3 743 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ABHD11Q8NFV4 315 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 FAM81AQ8TBF8 368 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PDCD6IPQ8WUM4 868 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 RFKQ969G6 155 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 RFT1Q96AA3 541 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ELSPBP1Q96BH3 223 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LRRC45Q96CN5 670 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 MYEOVQ96EZ4 313 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF479Q96JC4 524 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PRRC1Q96M27 445 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 MTMR9Q96QG7 549 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 GATA5Q9BWX5 397 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SPATA16Q9BXB7 569 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TM6SF1Q9BZW5 370 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 FBXO44Q9H4M3 255 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ZDHHC6Q9H6R6 413 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 ESRP2Q9H6T0 727 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SEBOXQ9HB31 216 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 LY9Q9HBG7 655 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SGK2Q9HBY8 427 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms