RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 NUP107P57740 925 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 KLRB1Q12918 225 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 ABHD17BQ5VST6 288 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 ZADH2Q8N4Q0 377 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 RNF148Q8N7C7 305 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 TNRC6AQ8NDV7 1962 aaKnown RBP18.24■□□□□ 0.51
LSM4-203ENST00000593829 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.24■□□□□ 0.51
LSM4-203ENST00000593829 SLCO4A1Q96BD0 722 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 RMND5BQ96G75 393 aaPredicted RBP18.24■□□□□ 0.51
LSM4-203ENST00000593829 FCRL1Q96LA6 429 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 ZNF354BQ96LW1 612 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 DEFB126Q9BYW3 111 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 MEAF6Q9HAF1 191 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 MYNNQ9NPC7 610 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 ARMC1Q9NVT9 282 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 STMN3Q9NZ72 180 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 UTS2RQ9UKP6 389 aa18.24■□□□□ 0.51
LSM4-203ENST00000593829 TRBV11-1A0A0K0K1C0 115 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 ATP6AP2A0A1C7CYW4 349 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 TRIM64A6NGJ6 449 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 ATP6AP2O75787 350 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 C1QL1O75973 258 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 DDAH2O95865 285 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 CPMP14384 443 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 PORP16435 677 aaPredicted RBP18.23■□□□□ 0.51
LSM4-203ENST00000593829 GALNSP34059 522 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 C2orf80Q0P641 193 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 ATP6AP1LQ52LC2 224 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 SAMD4BQ5PRF9 694 aaKnown RBP18.23■□□□□ 0.51
LSM4-203ENST00000593829 ACER2Q5QJU3 275 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 DGAT2L6Q6ZPD8 337 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 IKBIPQ70UQ0 350 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 ZNF843Q8N446 348 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 GOLM1Q8NBJ4 401 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 OR1N1Q8NGS0 311 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 FNDC8Q8TC99 324 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 SLC2A12Q8TD20 617 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 RIT1Q92963 219 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 SPAG4Q9NPE6 437 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 TMEM181Q9P2C4 612 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 ZNF780BQ9Y6R6 833 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 TLN1Q9Y490 2541 aaKnown RBP18.23■□□□□ 0.51
LSM4-203ENST00000593829 CSNK2A2P19784 350 aaPredicted RBP18.23■□□□□ 0.51
LSM4-203ENST00000593829 DDCP20711 480 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 FCRLBQ6BAA4 426 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 REP15Q6BDI9 236 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 FAM71E1Q6IPT2 247 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 PAOXQ6QHF9 649 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 RBMXL3Q8N7X1 1067 aaKnown RBP18.23■□□□□ 0.51
LSM4-203ENST00000593829 LRTOMTQ8WZ04 291 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 TUBGCP3Q96CW5 907 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 SENP5Q96HI0 755 aaPredicted RBP18.23■□□□□ 0.51
LSM4-203ENST00000593829 ART5Q96L15 291 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 PPP1R36Q96LQ0 422 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 PLGRKTQ9HBL7 147 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 EHD3Q9NZN3 535 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 COPS7AQ9UBW8 275 aa18.23■□□□□ 0.51
LSM4-203ENST00000593829 A0A1W2PS29 197 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 DYTNA2CJ06 578 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 TACR1P25103 407 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 MAPK1P28482 360 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 MEP1AQ16819 746 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 ZNF750Q32MQ0 723 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 NHSL2Q5HYW2 709 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 C6orf136Q5SQH8 315 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 KRT80Q6KB66 452 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 GK5Q6ZS86 529 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 RPS19BP1Q86WX3 136 aaKnown RBP18.22■□□□□ 0.51
LSM4-203ENST00000593829 SAMD14Q8IZD0 417 aaPredicted RBP18.22■□□□□ 0.51
LSM4-203ENST00000593829 FBXL20Q96IG2 436 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 C8orf4Q9NR00 106 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 GIMAP2Q9UG22 337 aa18.22■□□□□ 0.51
LSM4-203ENST00000593829 ZNF223Q9UK11 482 aaPredicted RBP18.22■□□□□ 0.51
LSM4-203ENST00000593829 FBP2O00757 339 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ZFAND5O76080 213 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 SDC1P18827 310 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 FEN1P39748 380 aaKnown RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 NRF1Q16656 503 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 INTS11Q5TA45 600 aaKnown RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 HSDL2Q6YN16 418 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 LGI4Q8N135 537 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ZNF721Q8TF20 911 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 TFAP2CQ92754 450 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 EXOSC8Q96B26 276 aaKnown RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 CNRIP1Q96F85 164 aaPredicted RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 CNPPD1Q9BV87 410 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 MFRPQ9BY79 579 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 CDCP1Q9H5V8 836 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 MIEF1Q9NQG6 463 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ABI3Q9P2A4 366 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 SMG1Q96Q15 3661 aaKnown RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 A0A087WXM4 84 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 SNRPB2P08579 225 aaKnown RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 CD97P48960 835 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ARG2P78540 354 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ZNF267Q14586 743 aaPredicted RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 HMBOX1Q6NT76 420 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ZNF554Q86TJ5 538 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 GALNT12Q8IXK2 581 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ZNF321PQ8N8H1 164 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms