RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 STX16O14662 325 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 ACOX3O15254 700 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 CBR3O75828 277 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 CSNK2A2P19784 350 aaPredicted RBP14.85□□□□□ -0.03
LIG1-205ENST00000593425 GCKP35557 465 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
LIG1-205ENST00000593425 CPA2P48052 419 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 STARP49675 285 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 EMDP50402 254 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 GFRA1P56159 465 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 MRPS35P82673 323 aaKnown RBP14.85□□□□□ -0.03
LIG1-205ENST00000593425 IFT88Q13099 833 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 SNTA1Q13424 505 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 GGTA1PQ4G0N0 100 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 IFNEQ86WN2 208 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 TRPC4APQ8TEL6 797 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 TM4SF18Q96CE8 201 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 KLHL29Q96CT2 875 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 CNRIP1Q96F85 164 aaPredicted RBP14.85□□□□□ -0.03
LIG1-205ENST00000593425 C18orf12Q96KH6 178 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 ZFP3Q96NJ6 502 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 DACH2Q96NX9 599 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 TM9SF2Q99805 663 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 ELOVL6Q9H5J4 265 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 NEUROD4Q9HD90 331 aa14.85□□□□□ -0.03
LIG1-205ENST00000593425 FLNAP21333 2647 aaKnown RBP14.85□□□□□ -0.03
LIG1-205ENST00000593425 DNHD1Q96M86 4753 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 FRG2CA6NGY1 282 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 B4DXG7 233 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 PPP6CO00743 305 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 NME6O75414 186 aaPredicted RBP14.84□□□□□ -0.03
LIG1-205ENST00000593425 PDYNP01213 254 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 RPS17P08708 135 aaKnown RBP14.84□□□□□ -0.03
LIG1-205ENST00000593425 PCSK2P16519 638 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 TSPAN8P19075 237 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 DRD5P21918 477 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 MAGEA12P43365 314 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 PPICP45877 212 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 LHX2P50458 406 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 HMGCS1Q01581 520 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 C10orf62Q5T681 223 aaPredicted RBP14.84□□□□□ -0.03
LIG1-205ENST00000593425 LETMD1Q6P1Q0 360 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 ENPP6Q6UWR7 440 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 MILR1Q7Z6M3 343 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 WNT2BQ93097 391 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 TMBIM1Q969X1 311 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 ISL2Q96A47 359 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 ZNF681Q96N22 645 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 UCN2Q96RP3 112 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 HBEGFQ99075 208 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 ANKRA2Q9H9E1 313 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 ZDHHC18Q9NUE0 388 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 FBXL2Q9UKC9 423 aa14.84□□□□□ -0.03
LIG1-205ENST00000593425 NAV3Q8IVL0 2385 aa14.83□□□□□ -0.03
LIG1-205ENST00000593425 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 C17orf51A8MQB3 221 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 PLOD2O00469 737 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 TO15178 435 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 GUCY1B2O75343 617 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 TNFSF13O75888 250 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 TGM6O95932 706 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 RBP1P09455 135 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 INHBBP09529 407 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 TCEA1P23193 301 aaKnown RBP14.83□□□□□ -0.04
LIG1-205ENST00000593425 SRD5A2P31213 254 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 ALDH9A1P49189 494 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 CLDN18P56856 261 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 NKX6-1P78426 367 aaPredicted RBP14.83□□□□□ -0.04
LIG1-205ENST00000593425 SLC7A5Q01650 507 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 CXorf67Q86X51 503 aaPredicted RBP14.83□□□□□ -0.04
LIG1-205ENST00000593425 PLCZ1Q86YW0 608 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 C1orf52Q8N6N3 182 aaKnown RBP14.83□□□□□ -0.04
LIG1-205ENST00000593425 SELENOMQ8WWX9 145 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 SMPDL3BQ92485 455 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 ACSS3Q9H6R3 686 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 BEX4Q9NWD9 120 aaPredicted RBP14.83□□□□□ -0.04
LIG1-205ENST00000593425 TAS2R10Q9NYW0 307 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 NINJ2Q9NZG7 142 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 HEY2Q9UBP5 337 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 PRODH2Q9UF12 536 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 TMCO1Q9UM00 188 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 GPR55Q9Y2T6 319 aaPredicted RBP14.83□□□□□ -0.04
LIG1-205ENST00000593425 TESMINQ9Y4I5 508 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 WIF1Q9Y5W5 379 aa14.83□□□□□ -0.04
LIG1-205ENST00000593425 OR6C70A6NIJ9 312 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 A8MXE2 369 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 HCRTR2O43614 444 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 SMIM24O75264 130 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 REM1O75628 298 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 ZNF708P17019 499 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 ADSLP30566 484 aaPredicted RBP14.82□□□□□ -0.04
LIG1-205ENST00000593425 CPOXP36551 454 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 CDH13P55290 713 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 CORO7P57737 925 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 ZNF628Q5EBL2 1059 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 TCHHL1Q5QJ38 904 aaPredicted RBP14.82□□□□□ -0.04
LIG1-205ENST00000593425 GRAMD2AQ8IUY3 354 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 ZNF483Q8TF39 744 aaPredicted RBP14.82□□□□□ -0.04
LIG1-205ENST00000593425 TMCO6Q96DC7 493 aa14.82□□□□□ -0.04
LIG1-205ENST00000593425 SLC35A4Q96G79 324 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms