RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
H3F3B-213ENST00000593254 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 FNDC7Q5VTL7 733 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 TMEM198Q66K66 360 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 ZNF585AQ6P3V2 769 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 TMEM81Q6P7N7 255 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 B3GNT6Q6ZMB0 384 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 FRMD7Q6ZUT3 714 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 CCDC71Q8IV32 467 aaPredicted RBP12.08□□□□□ -0.48
H3F3B-213ENST00000593254 PRR22Q8IZ63 422 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 SAMD14Q8IZD0 417 aaPredicted RBP12.08□□□□□ -0.48
H3F3B-213ENST00000593254 CCNYL1Q8N7R7 359 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 NEIL3Q8TAT5 605 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 UBLCP1Q8WVY7 318 aaPredicted RBP12.08□□□□□ -0.48
H3F3B-213ENST00000593254 HSPBAP1Q96EW2 488 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 LCORQ96JN0 433 aaPredicted RBP12.08□□□□□ -0.48
H3F3B-213ENST00000593254 JSRP1Q96MG2 331 aaPredicted RBP12.08□□□□□ -0.48
H3F3B-213ENST00000593254 TTYH2Q9BSA4 534 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 ITPAQ9BY32 194 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 SLC6A15Q9H2J7 730 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 UBQLN3Q9H347 655 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 EXO5Q9H790 373 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 MID1IP1Q9NPA3 183 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 SIRT5Q9NXA8 310 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 BCAP29Q9UHQ4 241 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 ST6GALNAC2Q9UJ37 374 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 PLLPQ9Y342 182 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
H3F3B-213ENST00000593254 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
H3F3B-213ENST00000593254 H3BQF6 201 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 PLIN3O60664 434 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 CTAG2O75638 210 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 PPM1BO75688 479 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 ZWINTO95229 277 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 GLI4P10075 376 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 GABRA1P14867 456 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 PCSK2P16519 638 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 KRT15P19012 456 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 CRHR1P34998 444 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 GSTM5P46439 218 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 CCT5P48643 541 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 EMDP50402 254 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 DNAJB13P59910 316 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 DCAF7P61962 342 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 RPP38P78345 283 aaKnown RBP12.07□□□□□ -0.48
H3F3B-213ENST00000593254 MRPS35P82673 323 aaKnown RBP12.07□□□□□ -0.48
H3F3B-213ENST00000593254 LTBQ06643 244 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 HEPACAMQ14CZ8 416 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 CEBPEQ15744 281 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 NNATQ16517 81 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 ZNF628Q5EBL2 1059 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 CCDC116Q8IYX3 515 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 OR52R1Q8NGF1 315 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 C16orf78Q8WTQ4 265 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.07□□□□□ -0.481e-7■■■■■ 69.5
H3F3B-213ENST00000593254 HGDQ93099 445 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 ERP27Q96DN0 273 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 TMEM41AQ96HV5 264 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 ALPK1Q96QP1 1244 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 SHCBP1LQ9BZQ2 653 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 LIME1Q9H400 295 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 DNAJB12Q9NXW2 375 aaKnown RBP12.07□□□□□ -0.48
H3F3B-213ENST00000593254 EHD3Q9NZN3 535 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 PRODH2Q9UF12 536 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 GRID1Q9ULK0 1009 aa12.07□□□□□ -0.48
H3F3B-213ENST00000593254 SMIM23A6NLE4 172 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 TO15178 435 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 CDH16O75309 829 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 HPNP05981 417 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 ANXA4P09525 319 aaPredicted RBP12.06□□□□□ -0.48
H3F3B-213ENST00000593254 DRD5P21918 477 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 PPICP45877 212 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 MASP1P48740 699 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 TRPC1P48995 793 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 NAGLUP54802 743 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 ADAM8P78325 824 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 ZNF763Q0D2J5 394 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 MYBPHQ13203 477 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 C1orf185Q5T7R7 199 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 SCIMPQ6UWF3 145 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 TRIM46Q7Z4K8 759 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 ULK2Q8IYT8 1036 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 LIX1Q8N485 282 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 OR9A2Q8NGT5 310 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 RDH11Q8TC12 318 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 EPS8L3Q8TE67 593 aaKnown RBP12.06□□□□□ -0.48
H3F3B-213ENST00000593254 EXOSC8Q96B26 276 aaKnown RBP12.06□□□□□ -0.48
H3F3B-213ENST00000593254 OMA1Q96E52 524 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 GNRHR2Q96P88 292 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 BTBD9Q96Q07 612 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 EBPLQ9BY08 206 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 C12orf65Q9H3J6 166 aaKnown RBP12.06□□□□□ -0.48
H3F3B-213ENST00000593254 PFDN4Q9NQP4 134 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 SLC35C2Q9NQQ7 365 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 OXSMQ9NWU1 459 aa12.06□□□□□ -0.48
H3F3B-213ENST00000593254 GPR55Q9Y2T6 319 aaPredicted RBP12.06□□□□□ -0.48
H3F3B-213ENST00000593254 C15orf41Q9Y2V0 281 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms