RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GNGT1P63211 74 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 LRRC74AQ0VAA2 488 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 ZNF791Q3KP31 576 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 LYPD8Q6UX82 237 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 RTL4Q6ZR62 310 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 ZNF227Q86WZ6 799 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 SLC44A2Q8IWA5 706 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 DND1Q8IYX4 353 aaKnown RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 PRR22Q8IZ63 422 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 Q8NA96 180 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 TMEM178AQ8NBL3 297 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 SFXN5Q8TD22 340 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 MOAP1Q96BY2 351 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 SPACA9Q96E40 222 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-221ENST00000593026 CCDC115Q96NT0 180 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 HES7Q9BYE0 225 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 TIMMDC1Q9NPL8 285 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 KLHL1Q9NR64 748 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 BTNL2Q9UIR0 455 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 PCDHGB6Q9Y5F9 930 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 PCDHGA10Q9Y5H3 936 aa13.78□□□□□ -0.2
DDX39A-221ENST00000593026 CAPN14A8MX76 684 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 TO15178 435 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SUV39H1O43463 412 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CPSF4O95639 269 aaKnown RBP13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SPTA1P02549 2419 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SP1P08047 785 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CT45A8P0DMV1 189 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CT45A9P0DMV2 189 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 ABCD3P28288 659 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 ZFP36L2P47974 494 aaKnown RBP13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SEC24CP53992 1094 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 PSPHP78330 225 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 PSG6Q00889 435 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 PLCXD2Q0VAA5 305 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 TP53BP2Q13625 1128 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 VPS26BQ4G0F5 336 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CT45A2Q5DJT8 189 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SLC25A25Q6KCM7 469 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 MFSD12Q6NUT3 480 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 RPUSD3Q6P087 351 aaKnown RBP13.77□□□□□ -0.21
DDX39A-221ENST00000593026 NPSR1Q6W5P4 371 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 MDGA2Q7Z553 956 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 WDR53Q7Z5U6 358 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CNTRLQ7Z7A1 2325 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 ZNF605Q86T29 641 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CDRT4Q8N9R6 151 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 GOLM1Q8NBJ4 401 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 OR5AK3PQ8NH89 298 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SCMH1Q96GD3 660 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 SGCZQ96LD1 299 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
DDX39A-221ENST00000593026 RABEP2Q9H5N1 569 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 Q9N2J8 555 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 TMEM45AQ9NWC5 275 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 CCDC167Q9P0B6 97 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 OR10H1Q9Y4A9 318 aa13.77□□□□□ -0.21
DDX39A-221ENST00000593026 COL6A6A6NMZ7 2263 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 KALRNO60229 2985 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 RNF103-CHMP3A0A140T963 221 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 TTLL8A6PVC2 850 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 NR5A2O00482 541 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 NME2P1O60361 137 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 HMGN2P05204 90 aaKnown RBP13.76□□□□□ -0.21
DDX39A-221ENST00000593026 NAGAP17050 411 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 NME2P22392 152 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 KRT20P35900 424 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 PRIM2P49643 509 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 KCNK10P57789 538 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 RCAN2Q14206 197 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 INAQ16352 499 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 NTRK2Q16620 822 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 AGKQ53H12 422 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 BHLHB9Q6PI77 547 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 MSANTD1Q6ZTZ1 278 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 PRICKLE2Q7Z3G6 844 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 GALNTL5Q7Z4T8 443 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 SLC34A3Q8N130 599 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 FAM13CQ8NE31 585 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 FBXO30Q8TB52 745 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 C10orf82Q8WW14 230 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 JADE3Q92613 823 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 VPS33AQ96AX1 596 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 OMA1Q96E52 524 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 GIMAP5Q96F15 307 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 PANX1Q96RD7 426 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 LMF2Q9BU23 707 aaKnown RBP13.76□□□□□ -0.21
DDX39A-221ENST00000593026 TRIM4Q9C037 500 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 FAM107BQ9H098 131 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 ZNF385DQ9H6B1 395 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 RMND5AQ9H871 391 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 FAM53CQ9NYF3 392 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms