RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ZBED8Q8IZ13 594 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 SLC38A6Q8IZM9 456 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 KIRREL3Q8IZU9 778 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 FBXW8Q8N3Y1 598 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 ZNF843Q8N446 348 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 FBXL16Q8N461 479 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 CCDC185Q8N715 623 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RTL3Q8N8U3 475 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 MRPL43Q8N983 215 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 FNDC5Q8NAU1 212 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 PAPD5Q8NDF8 572 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 OR5T2Q8NGG2 359 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 OR5M8Q8NGP6 311 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 AKR7LQ8NHP1 331 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RNF128Q8TEB7 428 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 PROX1Q92786 737 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 CORO2AQ92828 525 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 BORCS5Q969J3 196 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 CPNE4Q96A23 557 aaPredicted RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 TAMM41Q96BW9 452 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 FBXO17Q96EF6 278 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 TCEAL4Q96EI5 215 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 PGM2Q96G03 612 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 GAL3ST4Q96RP7 486 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 KCNK16Q96T55 309 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 SSX3Q99909 188 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 FERMT1Q9BQL6 677 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RHNO1Q9BSD3 238 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 TRAF4Q9BUZ4 470 aaPredicted RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 SLC25A23Q9BV35 468 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 ZNF717Q9BY31 904 aaPredicted RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 GSDMCQ9BYG8 508 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 OR2B2Q9GZK3 357 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 VN1R1Q9GZP7 353 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 SLC5A7Q9GZV3 580 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 C11orf49Q9H6J7 331 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 MINDY3Q9H8M7 445 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RAVER2Q9HCJ3 691 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 CTPS2Q9NRF8 586 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 ABCB10Q9NRK6 738 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 DDX43Q9NXZ2 648 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 ADAM28Q9UKQ2 775 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 SLC7A7Q9UM01 511 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 PPIEQ9UNP9 301 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 EIF3LQ9Y262 564 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 NCKAP1Q9Y2A7 1128 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RPH3AQ9Y2J0 694 aaPredicted RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 MRPS7Q9Y2R9 242 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 CLCA3PQ9Y6N3 262 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RNF215Q9Y6U7 377 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 RIMS1Q86UR5 1692 aaKnown RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 MYOM3Q5VTT5 1437 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 DNMBPQ6XZF7 1577 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 INO80Q9ULG1 1556 aaPredicted RBP3.16□□□□□ -1.9
VMP1-212ENST00000591782 CCDC88BA6NC98 1476 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 NCOA2Q15596 1464 aa3.16□□□□□ -1.9
VMP1-212ENST00000591782 TOP2AP11388 1531 aaKnown RBP3.15□□□□□ -1.9
VMP1-212ENST00000591782 ITSN2Q9NZM3 1697 aa3.15□□□□□ -1.9
VMP1-212ENST00000591782 A0A0J9YYE9 177 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 hCG_1809904A0A1W2PP81 198 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 A0A1W2PPE2 198 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 A0A1W2PR64 198 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 FEZF1A0PJY2 475 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 HYKKA2RU49 373 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 ARHGEF35A5YM69 484 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 ANKUB1A6NFN9 424 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 ZNF233A6NK53 670 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 C12orf71A8MTZ7 269 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 A8MX80 341 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 KPNA7A9QM74 516 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 PRR32B1ATL7 298 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 E7ESA3 106 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 E9PAM4 449 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 GPR171O14626 319 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 PRRG1O14668 218 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 LRRTM2O43300 516 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 MED7O43513 233 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 CALUO43852 315 aaPredicted RBP3.15□□□□□ -1.91
VMP1-212ENST00000591782 OR10H2O60403 315 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 MFN2O95140 757 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 DIRAS3O95661 229 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 TGM6O95932 706 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 TRBC1P01850 177 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 S100A8P05109 93 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 SERPINA5P05154 406 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 STSP08842 583 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 STAG3L2P0CL84 134 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 SMIM6P0DI80 62 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 LIFP15018 202 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 RAB3AP20336 220 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 HNF1AP20823 631 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 MSR1P21757 451 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 AHCYP23526 432 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 S100PP25815 95 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 GIFP27352 417 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 HOXA9P31269 272 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 TLX1P31314 330 aaPredicted RBP3.15□□□□□ -1.91
VMP1-212ENST00000591782 CAPGP40121 348 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 CDKN2CP42773 168 aa3.15□□□□□ -1.91
VMP1-212ENST00000591782 SYKP43405 635 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms