RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
VPS4B-207ENST00000591519 MPDZO75970 2070 aa9.51□□□□□ -0.89
VPS4B-207ENST00000591519 ZFHX3Q15911 3703 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 C15orf38-AP3S2A0A0A6YYH1 394 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 C1orf226A1L170 272 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 CD8B2A6NJW9 211 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 SHISA8B8ZZ34 492 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 COPEO14579 308 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 DLX3O60479 287 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 GLRA3O75311 464 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 SPAG7O75391 227 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 ATP1B1P05026 303 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 NUDT17P0C025 328 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 BMP7P18075 431 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 KRT4P19013 534 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 GPX3P22352 226 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 ABCD3P28288 659 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 PTPN6P29350 595 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 SOX18P35713 384 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 ASCL1P50553 236 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 CCNG1P51959 295 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 PRICKLE4Q2TBC4 344 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 SGO1Q5FBB7 561 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 CCNYL2Q5T2Q4 361 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 BICRALQ6AI39 1079 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 SLC48A1Q6P1K1 146 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 NUP54Q7Z3B4 507 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 MILR1Q7Z6M3 343 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 TDRPQ86YL5 185 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 TNIP2Q8NFZ5 429 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 ZPLD1Q8TCW7 415 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 ACMSDQ8TDX5 336 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 NRGNQ92686 78 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 TM4SF18Q96CE8 201 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 LRRC46Q96FV0 321 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 WDYHV1Q96HA8 205 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 C1QTNF3Q9BXJ4 246 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 POLDIP3Q9BY77 421 aaKnown RBP9.5□□□□□ -0.89
VPS4B-207ENST00000591519 MRPL1Q9BYD6 325 aaKnown RBP9.5□□□□□ -0.89
VPS4B-207ENST00000591519 NXF5Q9H1B4 397 aaKnown RBP9.5□□□□□ -0.89
VPS4B-207ENST00000591519 CENPHQ9H3R5 247 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 PPCSQ9HAB8 311 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 BRF2Q9HAW0 419 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 RAB21Q9UL25 225 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 PSME2Q9UL46 239 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 EMCNQ9ULC0 261 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 CFL2Q9Y281 166 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 C15orf41Q9Y2V0 281 aa9.5□□□□□ -0.89
VPS4B-207ENST00000591519 ANKHD1Q8IWZ3 2542 aaKnown RBP9.5□□□□□ -0.89
VPS4B-207ENST00000591519 AKAP6Q13023 2319 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MBD3L4A6NDZ8 208 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MBD3L3A6NE82 208 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 GOLGA6L10A6NI86 522 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MBD3L5A6NJ08 208 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 KDM4EB2RXH2 506 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 PPP6CO00743 305 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 TO15178 435 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ACOX3O15254 700 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 PPM1BO75688 479 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 TRAPPC6AO75865 159 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 SUPT7LO94864 414 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 LRATO95237 230 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 IL18BPO95998 194 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ACTL6AO96019 429 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 GSTA1P08263 222 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 RPS17P08708 135 aaKnown RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MYL2P10916 166 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 CPN1P15169 458 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 CSNK2A2P19784 350 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 NT5EP21589 574 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 DRD5P21918 477 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 BMP5P22003 454 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ATP5F1P24539 256 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF136P52737 540 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MAPK12P53778 367 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 DCAF7P61962 342 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 TRA2BP62995 288 aaKnown RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 GALNT1Q10472 559 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 IFT88Q13099 833 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 KRT71Q3SY84 523 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 FLYWCH1Q4VC44 716 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 TTC19Q6DKK2 380 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 SLC30A6Q6NXT4 461 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 FAM111BQ6SJ93 734 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 COMMD6Q7Z4G1 85 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ZZZ3Q8IYH5 903 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 CCNYL1Q8N7R7 359 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 OR4F6Q8NGB9 312 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MBD3L2Q8NHZ7 208 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 HGDQ93099 445 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 HSPBAP1Q96EW2 488 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 LCORQ96JN0 433 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ZNF681Q96N22 645 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 TMEM237Q96Q45 408 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 UGT2B28Q9BY64 529 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 CLEC4MQ9H2X3 399 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 ELOVL6Q9H5J4 265 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 CCM2LQ9NUG4 571 aaPredicted RBP9.49□□□□□ -0.89
VPS4B-207ENST00000591519 MAT2BQ9NZL9 334 aa9.49□□□□□ -0.89
VPS4B-207ENST00000591519 CRIM1Q9NZV1 1036 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms