RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	TMIGD1	Q6UXZ0	262 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	B3GLCT	Q6Y288	498 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	THSD4	Q6ZMP0	1018 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	SLCO4C1	Q6ZQN7	724 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	PRUNE1	Q86TP1	453 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	STK32C	Q86UX6	486 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	EXOC3L1	Q86VI1	746 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	C1QL4	Q86Z23	238 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	DENND6A	Q8IWF6	608 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	PALM2	Q8IXS6	379 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	METTL25	Q8N6Q8	603 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	ZNF540	Q8NDQ6	660 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	TTL	Q8NG68	377 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	KCTD4	Q8WVF5	259 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	TANK	Q92844	425 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	HPS1	Q92902	700 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	FBXL8	Q96CD0	374 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	NXNL1	Q96CM4	212 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	RADIL	Q96JH8	1075 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	PRRG4	Q9BZD6	226 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	NXF5	Q9H1B4	397 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	OR10A5	Q9H207	317 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	CDC42EP4	Q9H3Q1	356 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	C12orf49	Q9H741	205 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	RPF2	Q9H7B2	306 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	NT5DC2	Q9H857	520 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	COPS7B	Q9H9Q2	264 aa	Predicted RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	FBXO6	Q9NRD1	293 aa	Predicted RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	INTS10	Q9NVR2	710 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	NPAP1	Q9NZP6	1156 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	KLRF1	Q9NZS2	232 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	XPR1	Q9UBH6	696 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	DYRK1B	Q9Y463	629 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	KCNE2	Q9Y6J6	123 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	PMF1-BGLAP	U3KQ54	211 aa		5.7	□□□□□ -1.5
DNMT1-222	ENST00000590619	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	UQCRHL	A0A096LP55	91 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	NPIPA5	A0A0B4J1W7	369 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	CTAGE9	A4FU28	777 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PRAMEF25	A6NGN4	478 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ANKDD1B	A6NHY2	528 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	POM121C	A8CG34	1229 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	C17orf51	A8MQB3	221 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	EFCAB8	A8MWE9	144 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ZNF814	B7Z6K7	855 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619		E7EVH7	732 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	NPIPA7	E9PJI5	369 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PRAMEF4	O60810	478 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PRKRA	O75569	313 aa	Known RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	HAUS5	O94927	633 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	STAMBP	O95630	424 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	GPR75	O95800	540 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	AVP	P01185	164 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	NPIPA8	P0DM63	369 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ETS1	P14921	441 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	S1PR1	P21453	382 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	APEX1	P27695	318 aa	Known RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	GALNS	P34059	522 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PTPN7	P35236	360 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	FDFT1	P37268	417 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	KCNC1	P48547	511 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	DSCR4	P56555	118 aa	Predicted RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	UBA52	P62987	128 aa	Known RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PLIN5	Q00G26	463 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	CHRNB3	Q05901	458 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SLAMF1	Q13291	335 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ITGAD	Q13349	1161 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SLBP	Q14493	270 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SWI5	Q1ZZU3	235 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PRAMEF9	Q5VWM5	478 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	C1orf229	Q6ZS94	237 aa	Predicted RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	NUFIP2	Q7Z417	695 aa	Known RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	C17orf47	Q8NEP4	570 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SLC35B2	Q8TB61	432 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ANKRD7	Q92527	254 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	KISS1R	Q969F8	398 aa	Predicted RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	OMA1	Q96E52	524 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SORCS2	Q96PQ0	1159 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	CHP1	Q99653	195 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	USB1	Q9BQ65	265 aa	Known RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	TBCD	Q9BTW9	1192 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	C1QTNF5	Q9BXJ0	243 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	IL22	Q9GZX6	179 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SLITRK2	Q9H156	845 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	STMN4	Q9H169	189 aa	Predicted RBP	5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	CXorf21	Q9HAI6	301 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ANO10	Q9NW15	660 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	EHD3	Q9NZN3	535 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	ASIC3	Q9UHC3	531 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	DKKL1	Q9UK85	242 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	USP22	Q9UPT9	525 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	SPEF1	Q9Y4P9	236 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	MAD1L1	Q9Y6D9	718 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	PLCE1	Q9P212	2302 aa		5.69	□□□□□ -1.5
DNMT1-222	ENST00000590619	LOC100653049	A0A140TA62	436 aa		5.68	□□□□□ -1.5
DNMT1-222	ENST00000590619		A0A1W2PS29	197 aa		5.68	□□□□□ -1.5
DNMT1-222	ENST00000590619	OR2M5	A3KFT3	312 aa		5.68	□□□□□ -1.5
DNMT1-222	ENST00000590619		H3BML4	177 aa		5.68	□□□□□ -1.5
DNMT1-222	ENST00000590619	GOLGA8M	H3BSY2	632 aa		5.68	□□□□□ -1.5

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