RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 NTNG2Q96CW9 530 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 TMCO6Q96DC7 493 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CNRIP1Q96F85 164 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF681Q96N22 645 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 FOXC2Q99958 501 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 GALNT9Q9HCQ5 603 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 CCM2LQ9NUG4 571 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 EHD3Q9NZN3 535 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 ST6GALNAC2Q9UJ37 374 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 MAPRE3Q9UPY8 281 aa16.36■□□□□ 0.21
PRKCSH-211ENST00000590098 EXOC1LA0A1B0GW35 172 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MBD3L4A6NDZ8 208 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MBD3L3A6NE82 208 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 PRAMEF25A6NGN4 478 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MBD3L5A6NJ08 208 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MANBAO00462 879 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 UGT2B11O75310 529 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 ULK1O75385 1050 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 CBR3O75828 277 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 PCSK2P16519 638 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 EMDP50402 254 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MRPS35P82673 323 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 DUSP2Q05923 314 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 CSTF3Q12996 717 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 GLE1Q53GS7 698 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 FBXW10Q5XX13 1052 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 POMZP3Q6PJE2 187 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 TMEM151AQ8N4L1 468 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 SIMC1Q8NDZ2 872 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MBD3L2Q8NHZ7 208 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 METTL6Q8TCB7 284 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 ZPLD1Q8TCW7 415 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 COL21A1Q96P44 957 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 LIME1Q9H400 295 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 SERHLQ9NQF3 203 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 MCM8Q9UJA3 840 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF225Q9UK10 706 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 EXO1Q9UQ84 846 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 DLGAP4Q9Y2H0 992 aa16.35■□□□□ 0.21
PRKCSH-211ENST00000590098 GNG14A0A1W2PPG7 69 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 FAM221AA4D161 298 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 FRG2CA6NGY1 282 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 TUBAL3A6NHL2 446 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 OR6C70A6NIJ9 312 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 EEF1E1-BLOC1S5C9J1V9 151 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 TO15178 435 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 EEF1E1O43324 174 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 PCDH7O60245 1069 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 REM1O75628 298 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 DRD2P14416 443 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 CPN1P15169 458 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 DNASE1P24855 282 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 TACR1P25103 407 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 HMOX2P30519 316 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 KRT20P35900 424 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 PTGDSP41222 190 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 AGFG1P52594 562 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 DGKQP52824 942 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 ERCC6LQ2NKX8 1250 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 UNC50Q53HI1 259 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 TCHHL1Q5QJ38 904 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF678Q5SXM1 525 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 ENPP6Q6UWR7 440 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 GPRIN3Q6ZVF9 776 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 CDC20BQ86Y33 519 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 CCDC116Q8IYX3 515 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 SAMD14Q8IZD0 417 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 GBP7Q8N8V2 638 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 TMBIM1Q969X1 311 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 EXOSC8Q96B26 276 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 MTBPQ96DY7 904 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 DTNBP1Q96EV8 351 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 ZNF382Q96SR6 550 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 GIMAP4Q9NUV9 329 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 TMEM216Q9P0N5 145 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 HEY2Q9UBP5 337 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 CBLCQ9ULV8 474 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 NFU1Q9UMS0 254 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 STK38LQ9Y2H1 464 aa16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 GPR55Q9Y2T6 319 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-211ENST00000590098 H0Y3Z8 333 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 ABCB7O75027 752 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 IL18BPO95998 194 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 IL3P08700 152 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 CTAGE8P0CG41 777 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 TMIGD3P0DMS9 266 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 CD99P14209 185 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 ECHS1P30084 290 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 SOX18P35713 384 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 SRYQ05066 204 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 HEPACAMQ14CZ8 416 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 DAZAP2Q15038 168 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 SPIN4Q56A73 249 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 ZNF628Q5EBL2 1059 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 TIFABQ6ZNK6 161 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 LCA5Q86VQ0 697 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 IFNEQ86WN2 208 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 TRIM42Q8IWZ5 723 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 CTAGE4Q8IX94 777 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 WDSUB1Q8N9V3 476 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms