RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PIGFQ07326 219 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 FUT5Q11128 374 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 DGCR6Q14129 220 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 LASP1Q14847 261 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 SYPL1Q16563 259 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 MANEAQ5SRI9 462 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 PEAR1Q5VY43 1037 aaPredicted RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 C18orf63Q68DL7 685 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 FIGLAQ6QHK4 219 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 TMEM107Q6UX40 140 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 SLC16A12Q6ZSM3 486 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 Q6ZSR6 202 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 AHSA2Q719I0 299 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 RNF44Q7L0R7 432 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 RD3Q7Z3Z2 195 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 P2RY8Q86VZ1 359 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 LRRC25Q8N386 305 aaPredicted RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 FRMD1Q8N878 549 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 AVL9Q8NBF6 648 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 OR5D16Q8NGK9 328 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 XAGE5Q8WWM1 108 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 RERGQ96A58 199 aaPredicted RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 SMIM10Q96HG1 83 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 C10orf90Q96M02 699 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 ZNF681Q96N22 645 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 TRNT1Q96Q11 434 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 OR2A5Q96R48 311 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 OR7D2Q96RA2 312 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 ZFYVE21Q9BQ24 234 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 COPS4Q9BT78 406 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 ACTRT3Q9BYD9 372 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 UCK2Q9BZX2 261 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 LYRM4Q9HD34 91 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 PALMDQ9NP74 551 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 CD93Q9NPY3 652 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 RASSF1Q9NS23 344 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 GPR27Q9NS67 375 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 RLIMQ9NVW2 624 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 NTMQ9P121 344 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 SLC13A4Q9UKG4 626 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 PNMA8BQ9ULN7 279 aaPredicted RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 ADAMTS9Q9P2N4 1935 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 IGHV1OR15-9A0A0B4J2B8 117 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 TRBV4-1A0A0J9YWV2 114 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PRAMEF27A3QJZ7 478 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 DUXAA6NLW8 204 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CLDN24A6NM45 220 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CLCA1A8K7I4 914 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 FFAR1O14842 300 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PGRMC2O15173 223 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ZSCAN9O15535 394 aaPredicted RBP9.34□□□□□ -0.91
VPS25-202ENST00000589219 LGI1O95970 557 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ALPPP05187 535 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 HMGN2P05204 90 aaKnown RBP9.34□□□□□ -0.91
VPS25-202ENST00000589219 CDK1P06493 297 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CHRM4P08173 479 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 SYPP08247 313 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PIPP12273 146 aaPredicted RBP9.34□□□□□ -0.91
VPS25-202ENST00000589219 GNSP15586 552 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ACVR2AP27037 513 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CD6P30203 668 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 MC3RP41968 323 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CTSKP43235 329 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 IDH2P48735 452 aaKnown RBP9.34□□□□□ -0.91
VPS25-202ENST00000589219 DUSP2Q05923 314 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 GPR18Q14330 331 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 GPR19Q15760 415 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CYP27C1Q4G0S4 372 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 SLX4IPQ5VYV7 408 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 FCRL6Q6DN72 434 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 TCTN3Q6NUS6 607 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CDC73Q6P1J9 531 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 KLHL17Q6TDP4 642 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CD300LDQ6UXZ3 194 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CCDC81Q6ZN84 652 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 TRIM73Q86UV7 250 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 OOSP2Q86WS3 158 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 FAM46DQ8NEK8 389 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 NUP43Q8NFH3 380 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 OR13H1Q8NG92 308 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 OR9A2Q8NGT5 310 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 OR10G6Q8NH81 332 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CCL4L1Q8NHW4 92 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 VANGL1Q8TAA9 524 aaPredicted RBP9.34□□□□□ -0.91
VPS25-202ENST00000589219 TBC1D15Q8TC07 691 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 UCN3Q969E3 161 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 BORCS5Q969J3 196 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
VPS25-202ENST00000589219 ELP4Q96EB1 424 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ARHGDIGQ99819 225 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 FUZQ9BT04 418 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ITPAQ9BY32 194 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ANKRD19PQ9H560 264 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 TMEM74BQ9NUR3 256 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms