RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ACP1P24666 158 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 STT3AP46977 705 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 ALDH3A2P51648 485 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 ARHGDIAP52565 204 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 HPCAP84074 193 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 MED21Q13503 144 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 SWT1Q5T5J6 900 aaKnown RBP11.27□□□□□ -0.61
CCBE1-203ENST00000589116 TCEAL6Q6IPX3 200 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 QSOX2Q6ZRP7 698 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 C16orf62Q7Z3J2 963 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 BPHLQ86WA6 291 aaPredicted RBP11.27□□□□□ -0.61
CCBE1-203ENST00000589116 SLITRK4Q8IW52 837 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 TCEAL3Q969E4 200 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 NRBF2Q96F24 287 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 RDH12Q96NR8 316 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 COL21A1Q96P44 957 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 STACQ99469 402 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 ALOXE3Q9BYJ1 711 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 PIGUQ9H490 435 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 ANKRA2Q9H9E1 313 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 ADAP2Q9NPF8 381 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 DUSP22Q9NRW4 184 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 LANCL2Q9NS86 450 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 SIDT1Q9NXL6 827 aaKnown RBP11.27□□□□□ -0.61
CCBE1-203ENST00000589116 DHCR7Q9UBM7 475 aaKnown RBP11.27□□□□□ -0.61
CCBE1-203ENST00000589116 SEC14L3Q9UDX4 400 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 RARRES3Q9UL19 164 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 SATB2Q9UPW6 733 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 MAU2Q9Y6X3 613 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 DSPPQ9NZW4 1301 aa11.27□□□□□ -0.61
CCBE1-203ENST00000589116 C7orf72A4D263 438 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 ADAMDEC1O15204 470 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 CDC123O75794 336 aaPredicted RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 AK1P00568 194 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 CHRM4P08173 479 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 HBQ1P09105 142 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 ALOX5P09917 674 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 CT62P0C5K7 136 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 DNAJA1P31689 397 aaKnown RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 DCTP40126 519 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 KCNJ5P48544 419 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 DAG1Q14118 895 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 GK3PQ14409 553 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 GPAT3Q53EU6 434 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 ARHGAP40Q5TG30 622 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 SHQ1Q6PI26 577 aaKnown RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 SMYD1Q8NB12 490 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 SLC16A11Q8NCK7 471 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 PROX1Q92786 737 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 HOXB13Q92826 284 aaPredicted RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 RIT1Q92963 219 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 SLC35A4Q96G79 324 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 NR1H4Q96RI1 486 aaPredicted RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 GABARAPL1Q9H0R8 117 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 TRIM45Q9H8W5 580 aaPredicted RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 REEP1Q9H902 201 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 MKKSQ9NPJ1 570 aaPredicted RBP11.26□□□□□ -0.61
CCBE1-203ENST00000589116 USE1Q9NZ43 259 aa11.26□□□□□ -0.61
CCBE1-203ENST00000589116 LRP3O75074 770 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 DNAJB5O75953 348 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 H6PDO95479 791 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 CBX7O95931 251 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 IFNW1P05000 195 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 FESP07332 822 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 ACP2P11117 423 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 FPR1P21462 350 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 MAP3K8P41279 467 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 OR1D4P47884 311 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 BTG2P78543 158 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 EPS8Q12929 822 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 ERV3-1Q14264 604 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 DUSP7Q16829 419 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 ARHGAP11BQ3KRB8 267 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 UNQ6494/PRO21346Q6UXR6 183 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 PRR23CQ6ZRP0 262 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 STK32CQ86UX6 486 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 MARVELD2Q8N4S9 558 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 RCBTB1Q8NDN9 531 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 CHDHQ8NE62 594 aaPredicted RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 APOBEC4Q8WW27 367 aaKnown RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 SLC9A6Q92581 669 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 OTUB1Q96FW1 271 aaPredicted RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 OR6C1Q96RD1 312 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF300Q96RE9 604 aaPredicted RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 EPYCQ99645 322 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 RBM4BQ9BQ04 359 aaKnown RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 RBM4Q9BWF3 364 aaKnown RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 SLC7A5P2Q9GIP4 190 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 SLC38A1Q9H2H9 487 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 SEMA4GQ9NTN9 838 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 SMPD3Q9NY59 655 aaPredicted RBP11.25□□□□□ -0.61
CCBE1-203ENST00000589116 NDUFAF4Q9P032 175 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 KCNE3Q9Y6H6 103 aa11.25□□□□□ -0.61
CCBE1-203ENST00000589116 AK5Q9Y6K8 562 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms