RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ANGPT2O15123 496 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ERN1O75460 977 aaKnown RBP18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ZCCHC18P0CG32 403 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 NAGAP17050 411 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 CYB561P49447 251 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 HLCSP50747 726 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 NR0B1P51843 470 aaKnown RBP18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ARG2P78540 354 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 KLF10Q13118 480 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 MTDHQ86UE4 582 aaKnown RBP18.11■□□□□ 0.49
CIRBP-220ENST00000588917 BEST3Q8N1M1 668 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ANKS4BQ8N8V4 417 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ZNF441Q8N8Z8 693 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 EXD3Q8N9H8 876 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 SIMC1Q8NDZ2 872 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ASB15Q8WXK1 588 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 VSTM2LQ96N03 204 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 BTBD9Q96Q07 612 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 RASL10BQ96S79 203 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 NPAS2Q99743 824 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 ANKRA2Q9H9E1 313 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 GIN1Q9NXP7 522 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 FAF1Q9UNN5 650 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-220ENST00000588917 PCDHGB3Q9Y5G1 929 aa18.11■□□□□ 0.49
CIRBP-220ENST00000588917 OR5H15A6NDH6 313 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 FRG2CA6NGY1 282 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 DCTN3O75935 186 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 WDPCPO95876 746 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 SOAT1P35610 550 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 TMED10P49755 219 aaKnown RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 TXNL4AP83876 142 aaKnown RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 KCNC4Q03721 635 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 ZNF155Q12901 538 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 STX5Q13190 355 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 DUSP8Q13202 625 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 C6orf10Q5SRN2 563 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 C6orf120Q7Z4R8 191 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 GTF2H4Q92759 462 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 PHF12Q96QT6 1004 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 ITPAQ9BY32 194 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 ACTRT3Q9BYD9 372 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 NMUR2Q9GZQ4 415 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 TRIM45Q9H8W5 580 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 LIN28AQ9H9Z2 209 aaKnown RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 SLC52A3Q9NQ40 469 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 LEF1Q9UJU2 399 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 MRTO4Q9UKD2 239 aaKnown RBP18.1■□□□□ 0.49
CIRBP-220ENST00000588917 TP53TG5Q9Y2B4 290 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 CAPN7Q9Y6W3 813 aa18.1■□□□□ 0.49
CIRBP-220ENST00000588917 MYO18BQ8IUG5 2567 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 RNF103-CHMP3A0A140T963 221 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 DUXAA6NLW8 204 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 TO15178 435 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 KRT75O95678 551 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 HMGN2P05204 90 aaKnown RBP18.09■□□□□ 0.49
CIRBP-220ENST00000588917 CHI3L1P36222 383 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-220ENST00000588917 CD96P40200 585 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 MAGEA8P43361 318 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 ANXA11P50995 505 aaKnown RBP18.09■□□□□ 0.49
CIRBP-220ENST00000588917 OC90Q02509 493 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-220ENST00000588917 UBAP2LQ14157 1087 aaKnown RBP18.09■□□□□ 0.49
CIRBP-220ENST00000588917 TLR1Q15399 786 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 CYP27C1Q4G0S4 372 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 SGCZQ96LD1 299 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 LMF2Q9BU23 707 aaKnown RBP18.09■□□□□ 0.49
CIRBP-220ENST00000588917 Q9N2J8 555 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 SERHLQ9NQF3 203 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 NPFFR2Q9Y5X5 522 aa18.09■□□□□ 0.49
CIRBP-220ENST00000588917 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 BBIP1A8MTZ0 92 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 A8MVJ9 347 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 KCNH1O95259 989 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 AGR2O95994 175 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 ALOX5P09917 674 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CT45A8P0DMV1 189 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CT45A9P0DMV2 189 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CAPN3P20807 821 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 KRT20P35900 424 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 PSMD4P55036 377 aaKnown RBP18.08■□□□□ 0.48
CIRBP-220ENST00000588917 PSG6Q00889 435 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 NFATC3Q12968 1075 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 TUBA3CQ13748 450 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CYLC2Q14093 348 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CT45A2Q5DJT8 189 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 COQ5Q5HYK3 327 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 MFSD12Q6NUT3 480 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 TUBA3EQ6PEY2 450 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 PRICKLE2Q7Z3G6 844 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 SLC44A2Q8IWA5 706 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CCDC197Q8NCU1 140 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 RP9Q8TA86 221 aaKnown RBP18.08■□□□□ 0.48
CIRBP-220ENST00000588917 ADAMTS15Q8TE58 950 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 HOXB13Q92826 284 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-220ENST00000588917 TMEM125Q96AQ2 219 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 GIMAP5Q96F15 307 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 LRRC37BQ96QE4 947 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 STACQ99469 402 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 SLC35A5Q9BS91 424 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 INPP5KQ9BT40 448 aa18.08■□□□□ 0.48
CIRBP-220ENST00000588917 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms