RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 DUSP8Q13202 625 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 SRSF6Q13247 344 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 GNA13Q14344 377 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 GTDC1Q4AE62 458 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 ATAD3BQ5T9A4 648 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 RNF130Q86XS8 419 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 APLFQ8IW19 511 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 C9orf40Q8IXQ3 194 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 TAGAPQ8N103 731 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 ARMC10Q8N2F6 343 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 JADE3Q92613 823 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 HSPBAP1Q96EW2 488 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 LCORQ96JN0 433 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 GAL3ST4Q96RP7 486 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 LHPPQ9H008 270 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 PIGUQ9H490 435 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 Q9N2J8 555 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 EQTNQ9NQ60 294 aa15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 MRTO4Q9UKD2 239 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-211ENST00000588907 URB1O60287 2271 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 K7ENP7 123 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 BMP2P12643 396 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC6A2P23975 617 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 CRATP43155 626 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 PSMD4P55036 377 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 PSME3P61289 254 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 CAPRIN1Q14444 709 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 RGNQ15493 299 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 EXOSC6Q5RKV6 272 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 INO80CQ6PI98 192 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 GPR155Q7Z3F1 870 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 SERPINA11Q86U17 422 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 DND1Q8IYX4 353 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC15A4Q8N697 577 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ZNF321PQ8N8H1 164 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 RBM15BQ8NDT2 890 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC22A8Q8TCC7 542 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 AURKBQ96GD4 344 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ECSITQ9BQ95 431 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ITPAQ9BY32 194 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ING2Q9H160 280 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ABCD2Q9UBJ2 740 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ZNF223Q9UK11 482 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 PRPF19Q9UMS4 504 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 LIPT1Q9Y234 373 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 GPR55Q9Y2T6 319 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ZNF451Q9Y4E5 1061 aa15.73■□□□□ 0.11
SCAMP4-211ENST00000588907 ARGFXA6NJG6 315 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 TO15178 435 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 GYG2O15488 501 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 NKX2-2O95096 273 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 ITGA3P26006 1051 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 TRHRP34981 398 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 MAP3K8P41279 467 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 TMED10P49755 219 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 MTPNP58546 118 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 CYP27C1Q4G0S4 372 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 ATP1A1-AS1Q5TC04 95 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 H3F3CQ6NXT2 135 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC30A8Q8IWU4 369 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 CLEC4FQ8N1N0 589 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 GALNT16Q8N428 558 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 METTL25Q8N6Q8 603 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 ZNF441Q8N8Z8 693 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 TNIP2Q8NFZ5 429 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 DOK4Q8TEW6 326 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 SNRNP27Q8WVK2 155 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC9A6Q92581 669 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 ADIPOR1Q96A54 375 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 THOC3Q96J01 351 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC39A3Q9BRY0 314 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 BTBD10Q9BSF8 475 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 OR51I1Q9H343 314 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 KAT8Q9H7Z6 458 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 ANKRA2Q9H9E1 313 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 ABI3Q9P2A4 366 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 MYOTQ9UBF9 498 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 P2RX2Q9UBL9 471 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 OR10H1Q9Y4A9 318 aa15.72■□□□□ 0.11
SCAMP4-211ENST00000588907 CELSR3Q9NYQ7 3312 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 GUSBP08236 651 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 CT45A8P0DMV1 189 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 CT45A9P0DMV2 189 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 ITGAMP11215 1152 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 LCN1P31025 176 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 KRT20P35900 424 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 CPOXP36551 454 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 MAN2A2P49641 1150 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC7A2P52569 658 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 MVDP53602 400 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 EEFSECP57772 596 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 DSTNP60981 165 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 MRPS22P82650 360 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 SLC25A3Q00325 362 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 PSG6Q00889 435 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 RBBP4Q09028 425 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 ZSCAN26Q16670 478 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 MEP1AQ16819 746 aa15.71■□□□□ 0.11
SCAMP4-211ENST00000588907 CYP51A1Q16850 503 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms