RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SIRT3Q9NTG7 399 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 HPF1Q9NWY4 346 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 THUMPD1Q9NXG2 353 aaKnown RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 LRFN1Q9P244 771 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 LEF1Q9UJU2 399 aaPredicted RBP8.39□□□□□ -1.07
CIRBP-218ENST00000588344 B3GNT3Q9Y2A9 372 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 TP53TG5Q9Y2B4 290 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 NDUFAF1Q9Y375 327 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 OR10H1Q9Y4A9 318 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 NPFFR2Q9Y5X5 522 aa8.39□□□□□ -1.07
CIRBP-218ENST00000588344 FER1L5A0AVI2 2057 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 A0A096LPI6 279 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 NR5A2O00482 541 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TP53I11O14683 189 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ANGPT2O15123 496 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ASNA1O43681 348 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 PRKNO60260 465 aaPredicted RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 KCNH1O95259 989 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 HMGN2P05204 90 aaKnown RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ALOX5P09917 674 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 FBXO45P0C2W1 286 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 MATN1P21941 496 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 CHI3L1P36222 383 aaPredicted RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 MAP3K8P41279 467 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ZFP36L2P47974 494 aaKnown RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TNFSF10P50591 281 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ZNF155Q12901 538 aaPredicted RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 KLRB1Q12918 225 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 KLF10Q13118 480 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TUBA3CQ13748 450 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 EFR3AQ14156 821 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 INAQ16352 499 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 DECR1Q16698 335 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ZNF791Q3KP31 576 aaPredicted RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TIGD2Q4W5G0 525 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TBCELQ5QJ74 424 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 C6orf10Q5SRN2 563 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 FCRLBQ6BAA4 426 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 MFSD12Q6NUT3 480 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 CDC73Q6P1J9 531 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TUBA3EQ6PEY2 450 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 RTL4Q6ZR62 310 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 Q6ZS92 163 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 SZRD1Q7Z422 152 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 MTDHQ86UE4 582 aaKnown RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ANKRD46Q86W74 232 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 SLC44A2Q8IWA5 706 aaPredicted RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 CLECL1Q8IZS7 167 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 TMEM178AQ8NBL3 297 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 PCYOX1LQ8NBM8 494 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 OR9I1Q8NGQ6 314 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 RP9Q8TA86 221 aaKnown RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 MIPOL1Q8TD10 442 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ADAMTS15Q8TE58 950 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 DOK4Q8TEW6 326 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 NUDT8Q8WV74 236 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 GTF2H4Q92759 462 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 PNPLA2Q96AD5 504 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 VPS33AQ96AX1 596 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 NEURL3Q96EH8 262 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 LRRC37BQ96QE4 947 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 NPAS2Q99743 824 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 SH3GL1Q99961 368 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 LMF2Q9BU23 707 aaKnown RBP8.38□□□□□ -1.07
CIRBP-218ENST00000588344 G6PC3Q9BUM1 346 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ITPAQ9BY32 194 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 NMUR2Q9GZQ4 415 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 PIGUQ9H490 435 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 RAD21L1Q9H4I0 556 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 CNIH4Q9P003 139 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ANAPC2Q9UJX6 822 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 CORO2BQ9UQ03 480 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 ERVK-11Q9UQG0 969 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 GMEB1Q9Y692 573 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 CAPN7Q9Y6W3 813 aa8.38□□□□□ -1.07
CIRBP-218ENST00000588344 MGAQ8IWI9 3026 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 OR6C70A6NIJ9 312 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 EVPLLA8MZ36 301 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 KLRC4-KLRK1H3BQV0 150 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 HS6ST1O60243 411 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 NKX2-2O95096 273 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 AK1P00568 194 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 SP1P08047 785 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 GUSBP08236 651 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 ABCD3P28288 659 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 GABRA3P34903 492 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 PTGER1P34995 402 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 SOAT1P35610 550 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 PIGAP37287 484 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 PNLIPRP2P54317 469 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 PSG6Q00889 435 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 PLCXD2Q0VAA5 305 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 DUSP8Q13202 625 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 SNTA1Q13424 505 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 GAB1Q13480 694 aa8.37□□□□□ -1.07
CIRBP-218ENST00000588344 CYLC2Q14093 348 aaPredicted RBP8.37□□□□□ -1.07
CIRBP-218ENST00000588344 OR1C1Q15619 314 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms