RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 LIX1Q8N485 282 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 SPPL2AQ8TCT8 520 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 RELTQ969Z4 430 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 CIDECQ96AQ7 238 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 PPP1R36Q96LQ0 422 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 C3orf30Q96M34 536 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 VSTM2LQ96N03 204 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 RILPQ96NA2 401 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 PSMG3-AS1Q96PY0 264 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 BTBD9Q96Q07 612 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 SECISBP2Q96T21 854 aaKnown RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 METTL7AQ9H8H3 244 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 ZDHHC11Q9H8X9 412 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 ZFP64Q9NPA5 681 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 SH3BP4Q9P0V3 963 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 GPR55Q9Y2T6 319 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-207ENST00000587256 CROCCQ5TZA2 2017 aa13.62□□□□□ -0.23
ATG4D-207ENST00000587256 A0A087WV62 115 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 PRRG2O14669 202 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 SCAMP2O15127 329 aaKnown RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 TBX19O60806 448 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ZG16O60844 167 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 TPOP07202 933 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ESRRAP11474 423 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 NAGAP17050 411 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 DRD5P21918 477 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 PTGS2P35354 604 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 RPL3P39023 403 aaKnown RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 RPL14P50914 215 aaKnown RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 PSPHP78330 225 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 BST1Q10588 318 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 FOXO1Q12778 655 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 MAD2L1Q13257 205 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 PDE7AQ13946 482 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 PTGR1Q14914 329 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF385BQ569K4 471 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 IL23RQ5VWK5 629 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 BICRALQ6AI39 1079 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 MTFR2Q6P444 385 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF551Q7Z340 670 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 SZRD1Q7Z422 152 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 CD163Q86VB7 1156 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 TLCD1Q96CP7 247 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 MTERF3Q96E29 417 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ZBED6CLQ96FA7 236 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 SORT1Q99523 831 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 EXO5Q9H790 373 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF703Q9H7S9 590 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ARGLU1Q9NWB6 273 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 C19orf53Q9UNZ5 99 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 EIF3LQ9Y262 564 aaKnown RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-207ENST00000587256 ZNF835Q9Y2P0 537 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 OR10H1Q9Y4A9 318 aa13.61□□□□□ -0.23
ATG4D-207ENST00000587256 DIDO1Q9BTC0 2240 aaKnown RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 ANKRD33BA6NCL7 494 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 WIPF3A6NGB9 483 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 LRRC3CA6NJW4 275 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 PLOD2O00469 737 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 TO15178 435 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 REM1O75628 298 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 ABCB1P08183 1280 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 CELA3AP09093 270 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 PRPS2P11908 318 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 IL12BP29460 328 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 WDR4P57081 412 aaKnown RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 HYAL4Q2M3T9 481 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 TMEM198Q66K66 360 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 NPSR1Q6W5P4 371 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 FGD2Q7Z6J4 655 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 PACS2Q86VP3 889 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 SLC44A2Q8IWA5 706 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 CHERPQ8IWX8 916 aaKnown RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 OR2L13Q8N349 312 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 FAM57AQ8TBR7 257 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 TMBIM1Q969X1 311 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 CCDC120Q96HB5 630 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 COL21A1Q96P44 957 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 OSBPL11Q9BXB4 747 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 C20orf27Q9GZN8 174 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 LDAHQ9H6V9 325 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 KLRF1Q9NZS2 232 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 PLEKHB1Q9UF11 243 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-207ENST00000587256 LIPGQ9Y5X9 500 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
ATG4D-207ENST00000587256 PRAMEF25A6NGN4 478 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 UPK1AO00322 258 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ABCB7O75027 752 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 UGT2B11O75310 529 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 SNX4O95219 450 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 CT45A8P0DMV1 189 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 CT45A9P0DMV2 189 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 GP1BBP13224 206 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 EFNA1P20827 205 aaPredicted RBP13.59□□□□□ -0.23
ATG4D-207ENST00000587256 GDF1P27539 372 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms