RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 UQCRBP14927 111 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 HPGDP15428 266 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ACADSP16219 412 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 IL7RP16871 459 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 MAOAP21397 527 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 IL12BP29460 328 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 RORAP35398 523 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 GCKP35557 465 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 TSPAN7P41732 249 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 RFX3P48380 749 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 GZMMP51124 257 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 MVDP53602 400 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SMIM11AP58511 58 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 DCAF7P61962 342 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 IGLV3-21P80748 117 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 MC2RQ01718 297 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SPIBQ01892 262 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 MAP4K2Q12851 820 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZNF267Q14586 743 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 NSDHLQ15738 373 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ATP6AP1Q15904 470 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 DECR1Q16698 335 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZSWIM7Q19AV6 140 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZNF750Q32MQ0 723 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 NKAIN1Q4KMZ8 207 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 LIN52Q52LA3 116 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 DCST2Q5T1A1 773 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 WLSQ5T9L3 541 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OGFRL1Q5TC84 451 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 MLIPQ5VWP3 458 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 FAM111BQ6SJ93 734 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ENPP6Q6UWR7 440 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 TREML4Q6UXN2 200 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZNF574Q6ZN55 896 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 DBX2Q6ZNG2 339 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZBTB49Q6ZSB9 765 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 RAB11FIP2Q7L804 512 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 RANBP3LQ86VV4 465 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 HIPK1Q86Z02 1210 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 TMEM151BQ8IW70 566 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ARHGEF39Q8N4T4 335 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZNF527Q8NB42 609 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SUMF1Q8NBK3 374 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 PAPD5Q8NDF8 572 aaKnown RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OR7G2Q8NG99 324 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OR52R1Q8NGF1 315 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SLC38A5Q8WUX1 472 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 PMM1Q92871 262 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 CDS1Q92903 461 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 MR1Q95460 341 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ANKRD9Q96BM1 317 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 LIN37Q96GY3 246 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZNF354BQ96LW1 612 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 COL21A1Q96P44 957 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 TRNT1Q96Q11 434 aaKnown RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 PKP2Q99959 881 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 YIPF4Q9BSR8 244 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 CRB3Q9BUF7 120 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OSBPL10Q9BXB5 764 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 PINK1Q9BXM7 581 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OR8D2Q9GZM6 311 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 TGIF2Q9GZN2 237 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 OR10A5Q9H207 317 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 PIGUQ9H490 435 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 EPS8L2Q9H6S3 715 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 WDR54Q9H977 334 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 CXorf21Q9HAI6 301 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 FBXO8Q9NRD0 319 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 AGPAT4Q9NRZ5 378 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 THSD1Q9NS62 852 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 GPATCH2Q9NW75 528 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 SIDT1Q9NXL6 827 aaKnown RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 GMPR2Q9P2T1 348 aaKnown RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 ENOPH1Q9UHY7 261 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 RIMS3Q9UJD0 308 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 CNOT11Q9UKZ1 510 aaKnown RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 TMCC3Q9ULS5 477 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ERVK-19Q9WJR5 959 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 C15orf41Q9Y2V0 281 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 LOXL2Q9Y4K0 774 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 HEMK1Q9Y5R4 338 aaPredicted RBP5.78□□□□□ -1.48
LIG3-206ENST00000586058 KIF26BQ2KJY2 2108 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 ZDBF2Q9HCK1 2354 aa5.78□□□□□ -1.48
LIG3-206ENST00000586058 A8MVJ9 347 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 IDSB3KWA1 339 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 G3V2T6 193 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 H0YJX3 145 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 hCG_2039718K7EN88 272 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 M0QX08 132 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 AP3D1O14617 1153 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 CSO75390 466 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 UGT2B17O75795 530 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 H6PDO95479 791 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 HPRP00739 348 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 IGHEP01854 428 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 MT-ND1P03886 318 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 DBIP07108 87 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 CTSBP07858 339 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZGLP1P0C6A0 271 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms