RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 B4GALT7Q9UBV7 327 aa12.73□□□□□ -0.37
PRKCSH-202ENST00000585540 GPR55Q9Y2T6 319 aaPredicted RBP12.73□□□□□ -0.37
PRKCSH-202ENST00000585540 ESPL1Q14674 2120 aa12.73□□□□□ -0.37
PRKCSH-202ENST00000585540 A0A1B0GUH1 482 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 EMC8O43402 210 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 ELAVL4P26378 380 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 LCN1P31025 176 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 SOX18P35713 384 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 MC3RP41968 323 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 PRIM2P49643 509 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 CASP6P55212 293 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 EXOSC7Q15024 291 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 ANXA8L1Q5VT79 327 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 FAM180BQ6P0A1 224 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 TMEM107Q6UX40 140 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 LARP4Q71RC2 724 aaKnown RBP eCLIP12.72□□□□□ -0.372e-11■□□□□ 9.4
PRKCSH-202ENST00000585540 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 FAM26EQ8N5C1 309 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 CDRT4Q8N9R6 151 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 FAM13CQ8NE31 585 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 OR7G2Q8NG99 324 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 OR8J2Q8NGG1 315 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 SPPL2AQ8TCT8 520 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 SFXN5Q8TD22 340 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 ACTRT2Q8TDY3 377 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 GFM2Q969S9 779 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 TMCO6Q96DC7 493 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF597Q96LX8 424 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 HES7Q9BYE0 225 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 LIN28AQ9H9Z2 209 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 FOLH1BQ9HBA9 442 aa12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 CNOT11Q9UKZ1 510 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 CHCHD2Q9Y6H1 151 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-202ENST00000585540 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 A0A1W2PRB8 838 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CLEC18AA5D8T8 446 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 UPK1AO00322 258 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 RNASET2O00584 256 aaKnown RBP12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF195O14628 629 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 AKAP10O43572 662 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 LRATO95237 230 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 STSP08842 583 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CT45A8P0DMV1 189 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CT45A9P0DMV2 189 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 G6PDP11413 515 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 IDO1P14902 403 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 GNLYP22749 145 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 PNLIPRP2P54317 469 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 PER3P56645 1201 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 GUCY1A3Q02108 690 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 PLGLB1Q02325 96 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF155Q12901 538 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 HSPB3Q12988 150 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 DUSP8Q13202 625 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 PTGR1Q14914 329 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 GSTA3Q16772 222 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 PRSS53Q2L4Q9 553 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 SLC9B1Q4ZJI4 515 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 ZNF385BQ569K4 471 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CT45A2Q5DJT8 189 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 SLC30A6Q6NXT4 461 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 MTFR2Q6P444 385 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CLEC18BQ6UXF7 455 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 GFRALQ6UXV0 394 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 SIAH3Q8IW03 269 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 FAM109AQ8N4B1 249 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CPSF7Q8N684 471 aaKnown RBP12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 CLEC18CQ8NCF0 446 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 OR56A1Q8NGH5 318 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 DOK4Q8TEW6 326 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 KAT2AQ92830 837 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 OMA1Q96E52 524 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 TMEM41AQ96HV5 264 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 DUSP26Q9BV47 211 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 WDR55Q9H6Y2 383 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 BAIAP2L1Q9UHR4 511 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 USH1CQ9Y6N9 552 aa12.71□□□□□ -0.37
PRKCSH-202ENST00000585540 POLEQ07864 2286 aa12.71□□□□□ -0.38
PRKCSH-202ENST00000585540 EXPH5Q8NEV8 1989 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 NBASA2RRP1 2371 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 ASNA1O43681 348 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 HS6ST1O60243 411 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 ZNF354AO60765 605 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 GLSO94925 669 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 KCNH1O95259 989 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 ABCB1P08183 1280 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 CCL3P10147 92 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 EPHA3P29320 983 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 IL12BP29460 328 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 PTGER1P34995 402 aa12.7□□□□□ -0.38
PRKCSH-202ENST00000585540 KIR3DL1P43629 444 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms