RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ATP6V1E2Q96A05 226 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 PIP5K1AQ99755 562 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 LRRC1Q9BTT6 524 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 ACBD3Q9H3P7 528 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 BCAP29Q9UHQ4 241 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 MAPRE3Q9UPY8 281 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 GPR55Q9Y2T6 319 aaPredicted RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 PLLPQ9Y342 182 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 FREM3P0C091 2139 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 OR6C70A6NIJ9 312 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 PLOD2O00469 737 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 GUCY1B2O75343 617 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 HEXAP06865 529 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 TYK2P29597 1187 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 GCKP35557 465 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 CCNG1P51959 295 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 MAPK12P53778 367 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 CLDN18P56856 261 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 GALNT1Q10472 559 aaPredicted RBP13.12□□□□□ -0.31
SDF2-202ENST00000585428 TRAF3Q13114 568 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 BCL2A1Q16548 175 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 TECRLQ5HYJ1 363 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 KLC3Q6P597 504 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 CCDC25Q86WR0 208 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 PLCZ1Q86YW0 608 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 LRRC75A-AS1Q8N1F1 130 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 ADCY4Q8NFM4 1077 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 OR52R1Q8NGF1 315 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 PHF21BQ96EK2 531 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 WFIKKN1Q96NZ8 548 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 NSUN5Q96P11 429 aaKnown RBP13.12□□□□□ -0.31
SDF2-202ENST00000585428 BRINP2Q9C0B6 783 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 FARSBQ9NSD9 589 aaKnown RBP13.12□□□□□ -0.31
SDF2-202ENST00000585428 TAS2R10Q9NYW0 307 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
SDF2-202ENST00000585428 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 PSME2Q9UL46 239 aa13.12□□□□□ -0.31
SDF2-202ENST00000585428 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
SDF2-202ENST00000585428 PRAMEF25A6NGN4 478 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 FRG2CA6NGY1 282 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 FAM171A2A8MVW0 826 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 B4DXG7 233 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 H0Y3Z8 333 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 STX16-NPEPL1H3BU86 382 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 STX16O14662 325 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 MSTNO14793 375 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 SIAH2O43255 324 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 ARHGEF9O43307 516 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 CTIFO43310 598 aaKnown RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 HCRTR2O43614 444 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 ERAL1O75616 437 aaKnown RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 LY6G6DO95868 133 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 TGM6O95932 706 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 ZNF708P17019 499 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 CNTFP26441 200 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 SRD5A2P31213 254 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 MC3RP41968 323 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 DIO3P55073 304 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 FAM27E3Q08E93 113 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 PLCXD2Q0VAA5 305 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 IFT88Q13099 833 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 AAGABQ6PD74 315 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 PRSS57Q6UWY2 283 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 MILR1Q7Z6M3 343 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 IFNEQ86WN2 208 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 GCNT2Q8N0V5 402 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 PTGR2Q8N8N7 351 aaPredicted RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 RDH11Q8TC12 318 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 RNF138Q8WVD3 245 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 TMCO6Q96DC7 493 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 CNRIP1Q96F85 164 aaPredicted RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 SLC35A4Q96G79 324 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 EHD3Q9NZN3 535 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 KLRF1Q9NZS2 232 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 PRODH2Q9UF12 536 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 FBXL2Q9UKC9 423 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 PACSIN3Q9UKS6 424 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 EIF3LQ9Y262 564 aaKnown RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 DLGAP4Q9Y2H0 992 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 TESMINQ9Y4I5 508 aa13.11□□□□□ -0.31
SDF2-202ENST00000585428 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
SDF2-202ENST00000585428 A0A1W2PNV4 684 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 DEFB108AA8MXU0 73 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 PPP6CO00743 305 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 TSPAN2O60636 221 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 REM1O75628 298 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 PDYNP01213 254 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 CRHP06850 196 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 RBP1P09455 135 aa13.1□□□□□ -0.31
SDF2-202ENST00000585428 CT45A8P0DMV1 189 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms