RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 C1QTNF3Q9BXJ4 246 aa13.67□□□□□ -0.22
VAPA-209ENST00000585042 BRINP2Q9C0B6 783 aa13.67□□□□□ -0.22
VAPA-209ENST00000585042 OR2B2Q9GZK3 357 aa13.67□□□□□ -0.22
VAPA-209ENST00000585042 BCAP29Q9UHQ4 241 aa13.67□□□□□ -0.22
VAPA-209ENST00000585042 SLC12A4Q9UP95 1085 aa13.67□□□□□ -0.22
VAPA-209ENST00000585042 ZNF780BQ9Y6R6 833 aa13.67□□□□□ -0.22
VAPA-209ENST00000585042 OR6C70A6NIJ9 312 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 DIAPH2O60879 1101 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 ERAL1O75616 437 aaKnown RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 INHBAP08476 426 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 HSD3B1P14060 373 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 HSD3B2P26439 372 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 PTGDSP41222 190 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 EMDP50402 254 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 PLCXD2Q0VAA5 305 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 GALNT1Q10472 559 aaPredicted RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 FOXD4Q12950 439 aaPredicted RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 DCST1Q5T197 706 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 FAM111BQ6SJ93 734 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 TAOK1Q7L7X3 1001 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 YRDCQ86U90 279 aaKnown RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 GBP7Q8N8V2 638 aaPredicted RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 ZNF681Q96N22 645 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 NODALQ96S42 347 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 PIGMQ9H3S5 423 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 DTX4Q9Y2E6 619 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 RPH3AQ9Y2J0 694 aaPredicted RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 GPR55Q9Y2T6 319 aaPredicted RBP13.66□□□□□ -0.22
VAPA-209ENST00000585042 DOCK7Q96N67 2140 aa13.66□□□□□ -0.22
VAPA-209ENST00000585042 FRG2CA6NGY1 282 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 EEF1E1-BLOC1S5C9J1V9 151 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 EEF1E1O43324 174 aaKnown RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 ATE1O95260 518 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 CBX7O95931 251 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 PDYNP01213 254 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 RPS17P08708 135 aaKnown RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 DRD2P14416 443 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 SOX18P35713 384 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 GFRA1P56159 465 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 KEAP1Q14145 624 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 BCL2A1Q16548 175 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 AAGABQ6PD74 315 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 PLCZ1Q86YW0 608 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 TRIM42Q8IWZ5 723 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 WDSUB1Q8N9V3 476 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 C9orf106Q8NAJ2 232 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 OR14L1PQ8NHC6 308 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 LINC01560Q8TB33 94 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 ZNF675Q8TD23 568 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 ZNF483Q8TF39 744 aaPredicted RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 SELENOMQ8WWX9 145 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 SMPDL3BQ92485 455 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 NSUN5Q96P11 429 aaKnown RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 COL21A1Q96P44 957 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 TUBA1CQ9BQE3 449 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 YIPF4Q9BSR8 244 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 RBM24Q9BX46 236 aaKnown RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 ITPAQ9BY32 194 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 SHCBP1LQ9BZQ2 653 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 MRPL46Q9H2W6 279 aaKnown RBP13.65□□□□□ -0.22
VAPA-209ENST00000585042 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 KLRF1Q9NZS2 232 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 XPR1Q9UBH6 696 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 VPS29Q9UBQ0 182 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 TRPS1Q9UHF7 1281 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 ZNF180Q9UJW8 692 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 PLLPQ9Y342 182 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 ACANP16112 2415 aa13.65□□□□□ -0.22
VAPA-209ENST00000585042 PRAMEF25A6NGN4 478 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 CLCA1A8K7I4 914 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 UGT2B11O75310 529 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 CRHP06850 196 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 SRD5A2P31213 254 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 HOXC12P31275 282 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 SLCO1A2P46721 670 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 AGFG1P52594 562 aaKnown RBP13.64□□□□□ -0.23
VAPA-209ENST00000585042 DIO3P55073 304 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 EFR3AQ14156 821 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 EXOSC7Q15024 291 aaKnown RBP13.64□□□□□ -0.23
VAPA-209ENST00000585042 TRMT12Q53H54 448 aaKnown RBP13.64□□□□□ -0.23
VAPA-209ENST00000585042 SGO1Q5FBB7 561 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 IFNEQ86WN2 208 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 OR52R1Q8NGF1 315 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 KLHL29Q96CT2 875 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 CNRIP1Q96F85 164 aaPredicted RBP13.64□□□□□ -0.23
VAPA-209ENST00000585042 SLC35A4Q96G79 324 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 NEUROD4Q9HD90 331 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 SERHLQ9NQF3 203 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 FARSBQ9NSD9 589 aaKnown RBP13.64□□□□□ -0.23
VAPA-209ENST00000585042 TAS2R10Q9NYW0 307 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 NDRG3Q9UGV2 375 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 MCM8Q9UJA3 840 aa13.64□□□□□ -0.23
VAPA-209ENST00000585042 NFU1Q9UMS0 254 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms